Pairwise Alignments

Query, 419 a.a., ABC transporter substrate-binding protein from Ralstonia solanacearum PSI07

Subject, 400 a.a., branched-chain amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  145 bits (367), Expect = 2e-39
 Identities = 117/414 (28%), Positives = 188/414 (45%), Gaps = 22/414 (5%)

Query: 9   VDRRTVLKSALAAVAVQLAPPFIRRARGEAPLRIGMVDPLTGVYAAVAQNEVTGARLAVA 68
           + RRT+LK++L A A    P  IR A    P     +  ++G +A+  +    G+RLAV 
Sbjct: 1   MQRRTLLKASLTAAAALSLPLSIRSAFAAEPFTFYGLKSMSGAFASYGKFADMGSRLAVQ 60

Query: 69  QINARGGILGRPIELLVEDSANDVGTGVQKARKLIERDQVSFLIGDVNSGIAQAIAQVSN 128
           Q      +LGR +   V D+  + G  V+K ++ I++D   F  G   S  A A+A+  +
Sbjct: 61  Q---HPQVLGRALNYKVIDTEGNAGKAVRKVQEAIQQDGARFFQGCTLSSSALAVAKEVD 117

Query: 129 EKKVLHIVSGGHTDTITGSDCKWNVYRVCNTT--SMEANAVANLLFTKYGKKWHFITPDY 186
           +   + +   G  D +TG DC    +R    T  ++    V  +      K+W+ ITP Y
Sbjct: 118 KVGGVFMTPVG-ADEVTGKDCNLATFRWSVPTYGAIRETMVPLIKLLPDAKRWYTITPQY 176

Query: 187 AFGHTLQKAAAADLQKLGGTITGNELTPLGTTDFSAYLIKARAANPDVLLVLPQGSDMVN 246
            FG  L + A   L++ G    GN    L   +FS YL  A AA PDVL++L  GS   N
Sbjct: 177 VFGEALLEGAKNVLKENGLEHIGNSYHSLQEQEFSGYLTNAIAAKPDVLVLLNFGSQSSN 236

Query: 247 CLKQIAQFGIGKQMHI-----AGLQQELESLEAMPPEARVGIWMFEWYWKQPGVPGVEKF 301
            L+Q   FGI ++M +     AGL Q     + +  +   G+++   YW Q   P + + 
Sbjct: 237 TLRQAVNFGIKERMKVLLVWSAGLDQ----FQELGSDVLEGVYLGAQYWHQVDTP-LNRE 291

Query: 302 VADIRKVNNGKVPTARHWFGFTSVHTLAAVANQEKTLDSRKLAEALGGFALADDVKLQPN 361
           +  + +   G  PT      + S   +        + D   +A+A+ G +          
Sbjct: 292 LVKLTQAQYGINPTYPLAADYISTKIMLDTIIATGSFDGPTVAKAMQGLSYEGPT----G 347

Query: 362 KCYYRKGDHQLMTSSFVGEALSKPAGDPEDLFRVDHVVAGDQTAPPESATGCTI 415
           K   R GDHQ++   ++   + K   D  D   +  V++  Q+ PP  ATGCT+
Sbjct: 348 KESIRAGDHQVIKDYYL--LIGKATADMADKDDLAKVLSAGQSFPPVEATGCTL 399