Pairwise Alignments
Query, 530 a.a., tetratricopeptide repeat-containing protein from Ralstonia solanacearum PSI07
Subject, 1246 a.a., Photosystem I assembly protein Ycf3 from Azospirillum sp. SherDot2
Score = 118 bits (295), Expect = 1e-30
Identities = 146/510 (28%), Positives = 203/510 (39%), Gaps = 75/510 (14%)
Query: 34 QAERCYRWVLERDPRHVPALLQLASLLQSDGQRVSEALPLLDTAIALQPRASALHVSRAI 93
+AE YR L + A L S LQ D R++EA A+ L R + +
Sbjct: 99 EAEAEYRRALALRDAYAEAHNSLGSALQ-DQDRLAEAGVHYRRALDLNARYAEAWANLGT 157
Query: 94 VLNALERRLDALESFAQACCLAPGDPGALYNLGLQYADLCCPAQTEVIARHLIGLRPDWP 153
+L A + +A + A L PG AL NLG+ + PA+ E A HL LR
Sbjct: 158 LLRAQDDYAEAETALRHALRLDPGHATALTNLGVVLKETGRPAEAE--AAHLGALRLAPG 215
Query: 154 AAHYML-LRALTALEADPAEIEPLYRYLIKSDPMNVSLRFAHGLMQLKAGNYAAGWDAQE 212
A M+ L L + E E LY + P R+ L L G A GW+ E
Sbjct: 216 DAETMVNLALLREAQGRGDEAEALYAQALIHAPGFALARWNLALRLLGRGRLADGWEEYE 275
Query: 213 WRWDIEPAKSAQQ----VFRQPRWAGGPLAGRRLLIVGEQGFGDILQFARYLPMLVERGA 268
R+ + + F + W G P GRRLL+ EQG GD L F LP L ER
Sbjct: 276 ARFASRRVSAGRSFSLPAFSEWTWDGAP--GRRLLVWREQGLGDELMFGTALPDLAERFG 333
Query: 269 QVILLLDDNRAALARLLGRIEGIEVVVGAQALPA-------------FDLYCPLASLPYV 315
+L+++ + A L L+GR V A PA D + P+ SLP +
Sbjct: 334 PEMLVVEVD-ARLTGLVGRALPGATVRAQTADPAPAPAPAPAPAPADADAHLPMGSLPQL 392
Query: 316 FDTAVDSIPV-PSYLSVDEADVAAWKQRLAHL-PRPWVGLCWAGSSEHVHNVRRSLPLCT 373
+ + P PS+L+ D +A W+ RLA L P VGLCW +
Sbjct: 393 LRSGLADFPARPSWLAPDPLRLAEWRDRLAALGPGLRVGLCWGSQN-------------- 438
Query: 374 GSRYYAERQARERRIMAVASRVAAACGVDGLDVAAARDALPSGWTMAPLLERTAGTFVSL 433
ER+A + +GW APLL V+L
Sbjct: 439 ---MLGERKASYTTL--------------------------AGW--APLLTLPGLIPVTL 467
Query: 434 QVGAHAADIDTLSASLRARVA--APLPAQPDFYETACLIRALDEVITVDTSAAHLSGAIG 491
Q A+I + A L R+ + D A LI LD V+TV +S ++GA+G
Sbjct: 468 QYDGREAEIAAVEAQLGLRIRRWPGTDLKNDLEGVAALIAGLDLVVTVASSVGEMAGALG 527
Query: 492 QRGRIITPMAPEWRWIERNGRSAWYPEMQL 521
P A +W + G W+P M+L
Sbjct: 528 VPVWRFGP-AGDWTAL-GTGVRPWFPSMRL 555
Score = 94.0 bits (232), Expect = 3e-23
Identities = 110/372 (29%), Positives = 147/372 (39%), Gaps = 65/372 (17%)
Query: 170 PAEIEPLYRYLIKSDPMNVSLRFAHGLMQLKAGNYAAGWDAQEWRWDIEPAKSAQQVFRQ 229
P E + YR ++ DP F G L G+ AAGW E R+ A ++ FR
Sbjct: 910 PVEADAAYRQAVEDDPALTLAAFNRGYAALAQGDLAAGWTGLEARFAAGQALPDRR-FRM 968
Query: 230 PRWAGGPLAGRRLLIVGEQGFGDILQFARYLPMLVER---GAQVILLLDDNRAALARLLG 286
P W GG L G+ LL+ EQG GD L + P L+ R GA +++ + R LA L
Sbjct: 969 PAWEGGELTGKTLLVWREQGVGDELMHSACYPDLIARTLSGAGRVIVECEPR--LAALFA 1026
Query: 287 RIEGIEVVVGAQALPA-FDLYCPLASLPYVFDTAVDSIPVP-SYLSVDEADVAAWKQRLA 344
R V A PA D + P SLP ++S +L DEA V W+ L
Sbjct: 1027 RSFPQATVRAATEDPADADCHVPAGSLPLQLGWGLESFATQGGWLRADEAAVERWRGWLG 1086
Query: 345 HLPRP-WVGLCWAGSSEHVHNVRRSLPLCTGSRYYAERQARERRIMAVASRVAAACGVDG 403
VGLCW G+ G
Sbjct: 1087 GTGSALTVGLCWRS------------------------------------------GLRG 1104
Query: 404 LDVAAARDALPSGWT-MAPLLERTAGTFVSLQVGAHAADIDTLSASLRARVA---APLPA 459
A RDA + T AP+L ++LQ A++ A R +A PL
Sbjct: 1105 ----ALRDANYAPLTDWAPILTLPGLRLITLQYDECEAEL--ADAERRFGIAIHRPPLDL 1158
Query: 460 QPDFYETACLIRALDEVITVDTSAAHLSGAIGQRGRIITPMAPEWRWIERNGRSAWYPEM 519
+ D A L ALD VI+ TS A ++GA+G I P A +W + G WYP M
Sbjct: 1159 KNDLDGAAALTAALDLVISAGTSVAEMAGALGVPVWRIGP-AGDWTAL-GTGCRPWYPSM 1216
Query: 520 QLI--PQGAIAG 529
+L+ QG G
Sbjct: 1217 RLVCPEQGGTLG 1228
Score = 60.5 bits (145), Expect = 4e-13
Identities = 55/189 (29%), Positives = 88/189 (46%), Gaps = 2/189 (1%)
Query: 17 ATLLQMAGWHAQSGDPEQAERCYRWVLERDPRHVPALLQLASLLQSDGQRVSEALPLLDT 76
A LL+ A H ++GD + AER YR +L D R+ AL L L GQ ++A+ L+
Sbjct: 14 AALLREALAHHRAGDLDGAERTYRAMLAADGRNADALHLLGVLHHQRGQD-ADAVRLIGQ 72
Query: 77 AIALQPRASALHVSRAIVLNALERRLDALESFAQACCLAPGDPGALYNLGLQYADLCCPA 136
A+A +P + H + + L+AL R +A + +A L A +LG D A
Sbjct: 73 AVARRPGVADQHANLGLALHALGRLAEAEAEYRRALALRDAYAEAHNSLGSALQDQDRLA 132
Query: 137 QTEVIARHLIGLRPDWPAAHYMLLRALTALEADPAEIEPLYRYLIKSDPMNVSLRFAHGL 196
+ V R + L + A + L L + D AE E R+ ++ DP + + G+
Sbjct: 133 EAGVHYRRALDLNARYAEA-WANLGTLLRAQDDYAEAETALRHALRLDPGHATALTNLGV 191
Query: 197 MQLKAGNYA 205
+ + G A
Sbjct: 192 VLKETGRPA 200
Score = 48.1 bits (113), Expect = 2e-09
Identities = 45/130 (34%), Positives = 60/130 (46%), Gaps = 11/130 (8%)
Query: 6 LAHSIAEEATPATL---LQMAGWHAQ------SGDPEQAERCYRWVLERDPRHVPALLQL 56
+A + A P L LQ+ W A+ SG +AE+ Y+ +L+R VPA L+
Sbjct: 571 MAAELRRLAPPPALPPALQIEEWLAEARDLHGSGRWPEAEKAYQRILDRGGE-VPAALEG 629
Query: 57 ASLLQSDGQRVSEALPLLDTAIALQPRASALHVSRAIVLNALERRLDALESFAQACCLAP 116
+LL R A LL AIA +P A H RA+ + DA + A LAP
Sbjct: 630 YALLGQQAGRPDIADTLLTRAIAAEPSADR-HKRRALARQEMGALADAEADWQAAAALAP 688
Query: 117 GDPGALYNLG 126
D AL NLG
Sbjct: 689 EDVEALGNLG 698
Score = 35.0 bits (79), Expect = 2e-05
Identities = 28/80 (35%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Query: 72 PLLDTAIALQPR-ASALHVSRAIVLNALERRLDALESFAQACCLAPGDPGALYNLGLQYA 130
P L A+AL P A A A L +R +A + + L PGDP A+ NLGL
Sbjct: 744 PFLMRALALDPAVAEAWTALSAEALRNPDRAAEAERTARRTLHLRPGDPAAVSNLGLAAL 803
Query: 131 DLCCPAQTEVIARHLIGLRP 150
L PA+ R + RP
Sbjct: 804 ALDRPAEAVAHLRLALQGRP 823
Score = 30.8 bits (68), Expect = 3e-04
Identities = 55/204 (26%), Positives = 81/204 (39%), Gaps = 9/204 (4%)
Query: 6 LAHSIAEEATPATLLQMAGWHAQSGDPEQAERCYRWVLERDPRHVPALLQLASLLQSDGQ 65
L +IA E + + A + G AE ++ P V AL L +L S G
Sbjct: 647 LTRAIAAEPSADRHKRRALARQEMGALADAEADWQAAAALAPEDVEALGNLGALRLSRGA 706
Query: 66 RVSEALPLLDTAIALQPRASALHVSRAIVLNALERRLDALESFAQACCLAPGDPGALYNL 125
+EA+ D A L P + L ++ + A+ +A L P A L
Sbjct: 707 -AAEAMEATDAARRLAPFHAGLWINAGLARQAMGGA--GRPFLMRALALDPAVAEAWTAL 763
Query: 126 G---LQYADLCCPAQTEVIARHLIGLRPDWPAAHYMLLRALTALEADPAEIEPLYRYLIK 182
L+ D A+ E AR + LRP PAA L A AL+ PAE R ++
Sbjct: 764 SAEALRNPDRA--AEAERTARRTLHLRPGDPAAVSNLGLAALALDR-PAEAVAHLRLALQ 820
Query: 183 SDPMNVSLRFAHGLMQLKAGNYAA 206
P +++ L +AG+ AA
Sbjct: 821 GRPGDLATLGNLALALERAGDGAA 844