Pairwise Alignments
Query, 530 a.a., tetratricopeptide repeat-containing protein from Ralstonia solanacearum PSI07
Subject, 1183 a.a., Photosystem I assembly protein Ycf3 from Azospirillum sp. SherDot2
Score = 128 bits (322), Expect = 1e-33
Identities = 153/570 (26%), Positives = 221/570 (38%), Gaps = 113/570 (19%)
Query: 9 SIAEEATPA---TLLQMAGWHAQSGDPEQAERCYRWVLERDPRHV----PALLQLASLLQ 61
++ E TPA LL A ++G P++AE YR + DPR P L L LL
Sbjct: 645 AVPEPETPADFDALLNHAADLHRNGRPDEAEAAYRAAIAADPRREALGHPDALHLLGLLM 704
Query: 62 SDGQRVSEALPLLDTAIALQPRASALHVSRAIVLNALERRLDALESFAQACCLAPGDPGA 121
R +AL L+ A+ + P +V +R D+ +FA+A L P P A
Sbjct: 705 HQTGRNDDALALIGEALRIDPAFPQAWNHLGLVHEMEKRHADSSFAFARALALHPAYPEA 764
Query: 122 LYNLGLQYADLCCPAQTEVIARHLIGLRPDWPAAHYML----------------LRALTA 165
L +LGL + PA+ + R I ++PD AH L R A
Sbjct: 765 LTHLGLVHQIGGRPAEGMRLHRRAIAIQPDHIPAHANLGHACELTGQTSEATGHYRRALA 824
Query: 166 LEADPA-----------------EIEPLYRYLIKSDPMNVSLRFAHGLMQLKAGNYAAGW 208
L+ + A E + R ++ DP + GLM L G A GW
Sbjct: 825 LQPESAEANNNLATMATLANRLDEAKSHLRRALRVDPGFALAAWNLGLMDLADGRIAEGW 884
Query: 209 DAQEWRWDIEPAKSAQQVFRQPRWAGGPLAGRRLLIVGEQGFGDILQFARYLPMLVERGA 268
R+ + A+++ R P W G L GRRLL+ EQG GD + FA L G
Sbjct: 885 AGYSRRFSARQLQRARRIDR-PVWTGEALRGRRLLVWSEQGVGDEILFASCFDAL--NGL 941
Query: 269 QVILLLDDNRAALARLLGRIEGIEV------VVGAQAL--PAFDLYCPLASLPYVFDTAV 320
+ ++ +R ++ G+ V G + + P +L P +LP + V
Sbjct: 942 DGPVTVECDRRLVSLFARSFPGVAVRAETADPAGRETIDPPDCELQMPAGNLPALVRDRV 1001
Query: 321 DSIP-VPSYLSVDEADVAAWKQRLAHLPRPWVGLCWAGSSEHVHNVRRSLPLCTGSRYYA 379
P P+YL D V W+ RLA LP VGL W
Sbjct: 1002 ARYPDRPAYLRPDPGLVVQWRDRLAALPGLKVGLAW------------------------ 1037
Query: 380 ERQARERRIMAVASRVAAACGVDGLDVAAARDALPSGWTMAPLLERTAGTFVSLQVGAHA 439
R + A R AA G+ + W LL+ + V LQ G
Sbjct: 1038 ------RSQIVTAQRAAAYTGL-------------ADW--VALLDMPGVSVVMLQYGDCT 1076
Query: 440 ADIDTL-SASLRARVAAPLPAQPDFYETACLIRALDEVITVDTSAAHLSGAIGQRGRIIT 498
A++ + +A+ R L + DF + LI LD VI+ T+ L+GA+G
Sbjct: 1077 AELARVETATRRLHRWDDLNLKDDFEGVSALIANLDLVISPATAVGELAGALG------- 1129
Query: 499 PMAPEWR-----WIE-RNGRSAWYPEMQLI 522
P WR W + G W+P M+LI
Sbjct: 1130 --TPVWRLGTRDWTQIGTGVRPWFPPMRLI 1157
Score = 87.8 bits (216), Expect = 2e-21
Identities = 135/501 (26%), Positives = 190/501 (37%), Gaps = 90/501 (17%)
Query: 54 LQLASLLQSDGQRVSEALPL---LDTAIALQPRASALH----VSRAIVLNALERRLDALE 106
+QLA + + +AL + LD AIA Q R H + L A+ ++ A E
Sbjct: 167 VQLAPGMVEAHNNLGDALAMAGRLDEAIA-QHRLVTRHRPDDATAFYNLGAVLQQKSAFE 225
Query: 107 S----FAQACCLAPGDPGALYNLGLQYADLCCPAQTEVIARHLIGLRPDWPAAHYMLLRA 162
S + QA P AL NLG L P Q E+ R + L P++ A Y L A
Sbjct: 226 SAEIAYRQALKRNPRHSAALNNLGSVLKRLGRPDQAELCHRQALDLYPEFVEARYNLGNA 285
Query: 163 LTALEADPAEIEPLYRYLIKSDPMNVSLRFAHGLMQLKAGNYAAGWDAQEWRWDIEPAKS 222
L A + E + + P + + L+ L G+ A GW E R+ A
Sbjct: 286 LQA-QGRYEEAAACFEEALAQQPDLATATYNLSLLALLHGDIARGWAGYERRFAAGEAVP 344
Query: 223 AQQVFRQPRWAGGPLAGRRLLIVGEQGFGDILQFARYLPMLVE-RGAQVILLLDDN---- 277
++ F PRW G L G+RLLI EQG GD + FA P +V G V + D
Sbjct: 345 NRR-FPIPRWGGEVLRGKRLLIWREQGVGDEMMFASCYPDVVAWAGGPVTIECDPRLVPL 403
Query: 278 -RAALARLLGRIEGIEVVVGAQAL------PAFDLYCPLASLPYVFDTAVDSI-PVPSYL 329
R + + R E + L P DL LP + ++ + P +L
Sbjct: 404 FRRSFPKATVRAESCTGDAFGEPLRETIDPPDCDLQVAAGDLPELLRGSLSAFEPQGPWL 463
Query: 330 SVDEADVAAWKQRLAHL-PRPWVGLCWAGSSEHVHNVRRSLPLCTGSRYYAERQARERRI 388
D A V W++RLA L P VG+ W ++
Sbjct: 464 VADPALVERWRERLAGLGPGLRVGIGW-----------------------------RSQL 494
Query: 389 MAVASRVAAACGVDGLDVAAARDALPSGWTMAPLLERTAGTFVSLQVGAHAADIDTLSAS 448
M V + A + W PL TFV+LQ G A++
Sbjct: 495 MTVDRKAAY--------------VMLEHW--GPLFAVPGLTFVNLQYGECEAELRAAEER 538
Query: 449 LRARVA--APLPAQPDFYETACLIRALDEVITVDTSAAHLSGAIGQRGRIITPMAPEWRW 506
+ A L + DF A L LD VI+ SA L+GA+G P WR+
Sbjct: 539 FGVTIHRWADLNLKDDFDGAAALTANLDLVISPAMSAGELAGALG---------LPVWRF 589
Query: 507 IERN----GRSA--WYPEMQL 521
R+ G A W+P M+L
Sbjct: 590 GSRDWTQLGTEARPWFPTMRL 610
Score = 50.8 bits (120), Expect = 3e-10
Identities = 45/153 (29%), Positives = 67/153 (43%), Gaps = 1/153 (0%)
Query: 14 ATPATLLQMAGWHAQSGDPEQAERCYRWVLERDPRHVPALLQLASLLQSDGQRVSEALPL 73
A +L A H Q+G +AER YR VL +DPR+ A+ L L G EA+ L
Sbjct: 2 AKHTNMLAQAVAHHQAGRAAEAERGYRDVLTKDPRNADAMHLLGVLALQSG-HAEEAVTL 60
Query: 74 LDTAIALQPRASALHVSRAIVLNALERRLDALESFAQACCLAPGDPGALYNLGLQYADLC 133
+ A+A + + L+A R +A+++ A L P +NLG A L
Sbjct: 61 IGKALAQTRGVADYWDNLGSALSAAGRPDEAVQAHHNATILDPQGAQRRHNLGNALAALG 120
Query: 134 CPAQTEVIARHLIGLRPDWPAAHYMLLRALTAL 166
+ + + L+PD+ A Y L AL
Sbjct: 121 RHDEAQRAFAAALALKPDYAKAWYNLGNGHAAL 153
Score = 40.4 bits (93), Expect = 4e-07
Identities = 33/95 (34%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
Query: 33 EQAERCYRWVLERDPRHVPALLQLASLLQSDGQRVSEALPLLDTAIALQPRASALHVSRA 92
E AE YR L+R+PRH AL L S+L+ G R +A A+ L P +
Sbjct: 225 ESAEIAYRQALKRNPRHSAALNNLGSVLKRLG-RPDQAELCHRQALDLYPEFVEARYNLG 283
Query: 93 IVLNALERRLDALESFAQACCLAPGDPGALYNLGL 127
L A R +A F +A P A YNL L
Sbjct: 284 NALQAQGRYEEAAACFEEALAQQPDLATATYNLSL 318
Score = 38.9 bits (89), Expect = 1e-06
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 30 GDPEQAERCYRWVLERDPRHVPALLQLASLLQSDGQRVSEALPLLDTAIALQP 82
G P+QAE C+R L+ P V A L + LQ+ G R EA + A+A QP
Sbjct: 256 GRPDQAELCHRQALDLYPEFVEARYNLGNALQAQG-RYEEAAACFEEALAQQP 307