Pairwise Alignments

Query, 895 a.a., PAS domain S-box protein from Ralstonia solanacearum PSI07

Subject, 1283 a.a., diguanylate phosphodiesterase from Pseudomonas simiae WCS417

 Score =  134 bits (338), Expect = 3e-35
 Identities = 159/545 (29%), Positives = 234/545 (42%), Gaps = 51/545 (9%)

Query: 377  MVYANQACRRLLGLT---LEEAMTGTWLARLHPQDREAVTAGWADAVTRGVGHCAELRVI 433
            M+++N      LG     L++     W   LHP+D E           R +G+  +L+  
Sbjct: 477  MIFSNHHLGHTLGYNKAELQQMGEYFWEILLHPEDAEHYHD--LRQQQRQIGYTTQLQCQ 534

Query: 434  VPGRDE-----RLLVVNTAPVRVEG-QVVGHVGAMEDITVRARAEQASRVLTQ----ILD 483
            +  R       R  +   A  R +  Q+   +G  +DIT +  A ++ R   Q    + +
Sbjct: 535  LRFRHRNNQWRRFDIREQALARDKTTQISRIIGVAKDITDQIEASESLRDSEQRYRMLAE 594

Query: 484  STTDFVAQTDVQGRVTYINPAGRRFAGVALD-----------ADVRDRRAETFYPDDTMQ 532
            S +D +  TD Q  + YI+P+     G  +D           A+ +         ++  +
Sbjct: 595  SISDVICSTDSQLALNYISPSVNAVLGYDVDWVFKNGWQSIIANPQQLTGIYSLMEEVSR 654

Query: 533  WLREVAVPTAARDGVWIGETTVFDAQR---RAVPINHMVIVHRDPMGRVEYFSSIMRDIT 589
             L +       RD +   +  +FD  R   R VPI   +++  D  G  E    + RDI+
Sbjct: 655  ALGDPEALNKLRDEIQT-QLFLFDCLRADGRKVPIELRMVLVWDEHGAFEGILGVGRDIS 713

Query: 590  QDKAAKEALQRSRETLQTVTDAM----PALVAFVDADERF-RFLNAAYEKVFDRPTAAML 644
            Q + A++ L+ +    +  T A+    PA    V A+E F R    A   V D+      
Sbjct: 714  QQRRAEKDLRMAATVFEHSTSAILITDPAGY-IVQANEAFSRVSGYAVSDVLDQLPNM-- 770

Query: 645  GLTVHEVLGEEAYAAMRGPLQRALAGETVVFEREAPDRDPYRCDEITYIPQFDARGRVAG 704
             LTV E         ++   Q +     V  +R   +  P     IT +  FD  G +A 
Sbjct: 771  -LTVDEQQEAHLRYVLKQLHQHSTWEGEVWLKRRNGEHYPAWVG-ITAV--FDDEGDLAS 826

Query: 705  VHAVMLDITERKKQELHLRALSTTDHLTGLLNRAGFEARLSAALAQARGDGTVGALLLLD 764
                  DI+ERK  E  +  L+  D LT L NR  F+ RL  AL  A    +   L+ LD
Sbjct: 827  YVCFFSDISERKASEQRIHRLAYYDALTHLPNRTLFQDRLHTALQAAERQKSWVVLMFLD 886

Query: 765  LDGFKVVNDTHGHAVGDALLRRFAQRLARTVRPCDGVARFGGDEFAVILAQP-------- 816
            LD FK +ND+ GHA GD +L+  A RL   V   D VAR GGDEF ++L QP        
Sbjct: 887  LDRFKPINDSLGHAAGDRMLKEMATRLLGCVAEDDTVARMGGDEFTLLL-QPRVNREMAL 945

Query: 817  DDARAVARHILAACDRPFRLGEAVVRVGASIGIAGFDAGTLAQSAVFEAADEALYEAKSR 876
            + A  VA  ILA+  +PF L      V ASIGIA         S + + AD A+Y AK R
Sbjct: 946  NRAIHVAEQILASLVKPFVLEGREFFVTASIGIALSPQDGNELSQLMKNADTAMYHAKER 1005

Query: 877  GKGLF 881
            GK  F
Sbjct: 1006 GKNNF 1010