Pairwise Alignments

Query, 895 a.a., PAS domain S-box protein from Ralstonia solanacearum PSI07

Subject, 994 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  142 bits (357), Expect = 1e-37
 Identities = 149/519 (28%), Positives = 222/519 (42%), Gaps = 64/519 (12%)

Query: 403 RLHPQDREAVTAGWADAVTRGVGHCAELRVIVPGRDERLL-VVNTAPVRVEGQVVGHVGA 461
           R  P+ R  +          G G   E++V+V G   + +  V TA  R  GQ+V   GA
Sbjct: 233 RYSPEWRNGIRQRLERCAQYGEGFDEEIQVMVEGGAPKWVRTVGTAVRRANGQIVRIQGA 292

Query: 462 MEDITVRARAEQ----ASRVLTQILDSTTDFVAQTDVQGRVTYINPAGRRFA-------- 509
           ++DI+ + +A+Q     +  LT  L S T+     D Q   TY+N    R          
Sbjct: 293 IQDISAQKQAQQDTLRLAMRLTTTLASITEAFVTLDRQCCFTYLNQESERLLQKTTADLL 352

Query: 510 --------GVALDADVRDRRAETFYPDDTMQWLREVAVPTAARDGVWIGETTVFDAQRRA 561
                      L   ++D+  ++   +  ++   E   PT    G W+        + RA
Sbjct: 353 GLEVWQGFSAGLSQRLKDQLTKSLNTNRRVEL--EDFFPTL---GKWL--------EVRA 399

Query: 562 VPINHMVIVHRDPMGRVEYFSSIMRDITQDKAAKEALQRSRETLQTVTDAMPALVAFVDA 621
            P            G   YF    RD+T+ + ++E L     ++  + D +        +
Sbjct: 400 YPFAE---------GLAVYF----RDVTERRRSQEQLMLLETSVSRLNDIVAIAETGAGS 446

Query: 622 DE---RFRFLNAAYEKVFDRPTAAMLGLTVHEVLG-EEAYAAMRG---PLQRALAGETVV 674
           D+   R  F+N A+E+      A +LG T   +L  + A   +R     LQ+     T +
Sbjct: 447 DDQEPRIVFVNDAFEQHTGYSRAEVLGQTPRMLLELDPAIPKLRELAQGLQQTRQARTEL 506

Query: 675 FEREAPDRDPYRCDEITYIPQFDARGRVAGVHAVMLDITERKKQELHLRALSTTDHLTGL 734
             R           E+  +        V    AV  DIT+RK  E  +R L+  D LT L
Sbjct: 507 MVRRK--NGAMFWVELEVVSVQATAEEVTHWVAVGRDITQRKTAEDMIRHLAFYDALTDL 564

Query: 735 LNRAGFEARLSAALAQARGDGTVGALLLLDLDGFKVVNDTHGHAVGDALLRRFAQRLART 794
            NR     RL  ALA +   G  GAL+ +DLD FK++NDT GH +GD LL++ A RL R+
Sbjct: 565 PNRQLLLDRLQQALAASARSGQHGALMFIDLDNFKILNDTLGHHMGDQLLQKVAARLTRS 624

Query: 795 VRPCDGVARFGGDEFAVIL----AQPD----DARAVARHILAACDRPFRLGEAVVRVGAS 846
           VR  D VAR GGDEF V++      PD     A A+A  +L     PF+L         S
Sbjct: 625 VRKTDMVARLGGDEFVVMVDDLSTDPDAAAFKATALAEKVLNTLREPFQLTGHQHFATPS 684

Query: 847 IGIAGFDAGTLAQSAVFEAADEALYEAKSRGKGLFVAFD 885
           IG+  F+        + + AD A+Y+AKS G+     FD
Sbjct: 685 IGVTSFNGQQSDVGELLKQADLAMYQAKSLGRNTLCFFD 723