Pairwise Alignments

Query, 304 a.a., putative D-alanine--D-alanine ligase from Pseudomonas putida KT2440

Subject, 318 a.a., D-alanine--D-alanine ligase from Pseudomonas simiae WCS417

 Score =  164 bits (415), Expect = 2e-45
 Identities = 106/294 (36%), Positives = 162/294 (55%), Gaps = 7/294 (2%)

Query: 5   IAIITGGNSSEREVSLQTSEAVSQSLKTLQISHEILTISDYRELLSLDLAKFTRVFLALH 64
           +A++ GG S+EREVSL++  AV  +L++  ++   + + D   +  L   K  R F+ LH
Sbjct: 20  VAVLFGGKSAEREVSLKSGNAVLDALQSAGVNAFGIDVGD-DFIARLQAEKIDRAFIILH 78

Query: 65  GGFGENGMAQAYLEGLGIPYNGPSPQASAICMDKLLTKHIARGLGINVANYLYSKNGDDV 124
           G  GE+G  Q  LE  GIPY G    ASA+ MDKL TK +   LGI    +    + DD 
Sbjct: 79  GRGGEDGSMQGLLECAGIPYTGSGVLASALAMDKLRTKQVWHSLGIPTPRHSVLCSEDD- 137

Query: 125 CFEEISERLGTPCIVKPNREGCSFGVSLVRDLKADLQPAINAAAKFHTGILIEEFISGPE 184
           C     E LG P IVKP  EG S G++ V    A+L  A  AA+ + + +L+E++I GPE
Sbjct: 138 CISAAKE-LGLPLIVKPAHEGSSIGMAKVNS-AAELIDAWKAASTYDSQVLVEQWIQGPE 195

Query: 185 LSVCYLNKSTLPIYTVEFESDFFSYDAKFISTKTNATLTI-LDRSTHQLVTNYCSAIAEA 243
            ++  L    LP   +     F+ YDAK++++ T   +   LD S  Q + +  +   EA
Sbjct: 196 YTIATLRGQVLPPIALGTPHTFYDYDAKYLASDTQYRIPCGLDASKEQELMDLTAKACEA 255

Query: 244 LEL-DYFRADFIVHNT-EPYLIELNTLPGLTSHSLFPKACQQHGIEFDKLVLIL 295
           L +  + RAD +  +  + + +E+NT PG+T HSL P A +  G++F +LVL +
Sbjct: 256 LGIAGWARADVMQDDQGDFWFLEVNTAPGMTDHSLVPMAARAAGLDFQQLVLAI 309