Pairwise Alignments

Query, 304 a.a., putative D-alanine--D-alanine ligase from Pseudomonas putida KT2440

Subject, 318 a.a., D-alanine--D-alanine ligase (EC 6.3.2.4) from Sphingobium sp. HT1-2

 Score =  103 bits (258), Expect = 4e-27
 Identities = 92/304 (30%), Positives = 147/304 (48%), Gaps = 26/304 (8%)

Query: 4   NIAIITGGNSSEREVSLQTSEAVSQSLKTLQISHEILTISDYRELLS-LDLAKFTRVFLA 62
           ++A++ GG S+ER VSL + E V+++L++    H +  I   R++ + L   K   VF A
Sbjct: 7   HVAVLMGGWSAERPVSLSSGEGVAKALESR--GHRVTRIDMDRDVAARLTETKADVVFNA 64

Query: 63  LHGGFGENGMAQAYLEGLGIPYNGPSPQASAICMDKLLTKHIARGLGINVANYLYSKNGD 122
           LHG  GE+G  Q  ++ +G+ Y       S I +DK LTK      GI +        G 
Sbjct: 65  LHGVPGEDGTVQGMMDLMGLTYTHSGLATSVIAIDKQLTKQALVPHGIPM------PGGQ 118

Query: 123 DVCFEEI--SERLGTPCIVKPNREGCSFGVSLVRDLKADLQPAINAAA---KFHTGILIE 177
            V  E +   + L  P ++KP  EG S GV++V        P    +    +    +L E
Sbjct: 119 IVASESLYAGDPLPRPYVLKPVNEGSSVGVAIVTAEGNYGNPIARDSVGPWQEFPELLAE 178

Query: 178 EFISGPELSVCYLNKSTLPIYTVEFESDFFSYDAKFISTKTNATLTILDRSTHQLVTNYC 237
            +I G EL+   L    L +  +  +S F+ +DAK+    T     +        +T  C
Sbjct: 179 PYIRGRELTTAVLGDEALLVTELRPKSGFYDFDAKYTDGMTE---HVCPAEIPDEITQAC 235

Query: 238 SAIA-EALEL----DYFRADFIVHNTEP----YLIELNTLPGLTSHSLFPKACQQHGIEF 288
            AIA +A +L       R+DF   +++     YL+E+NT PG+T  SL P+  ++ GIE+
Sbjct: 236 KAIALQAHQLLGCKGASRSDFRWDDSQGVEGLYLLEVNTQPGMTPLSLVPEQAKKLGIEY 295

Query: 289 DKLV 292
            +LV
Sbjct: 296 AELV 299