Pairwise Alignments

Query, 304 a.a., putative D-alanine--D-alanine ligase from Pseudomonas putida KT2440

Subject, 318 a.a., D-alanine--D-alanine ligase B from Pseudomonas putida KT2440

 Score =  162 bits (411), Expect = 7e-45
 Identities = 105/295 (35%), Positives = 163/295 (55%), Gaps = 9/295 (3%)

Query: 5   IAIITGGNSSEREVSLQTSEAVSQSLKTLQISHEILTISDYRELLS-LDLAKFTRVFLAL 63
           +A++ GG S+EREVSL++  AV  +L T  +    + + D  +LL+ L   K  R F+ L
Sbjct: 20  VAVLYGGKSAEREVSLKSGAAVIDALSTAGVDVVAIDVGD--DLLARLQSEKIDRAFIIL 77

Query: 64  HGGFGENGMAQAYLEGLGIPYNGPSPQASAICMDKLLTKHIARGLGINVANYLYSKNGDD 123
           HG  GE+G  Q  LE LGIPY G    ASA+ MDKL TK + + LGI    +    +  D
Sbjct: 78  HGRGGEDGSMQGLLECLGIPYTGSGILASALAMDKLRTKQVWQSLGIPTPRHAVLASESD 137

Query: 124 VCFEEISERLGTPCIVKPNREGCSFGVSLVRDLKADLQPAINAAAKFHTGILIEEFISGP 183
            C +  +E LG P IVKP  EG S G++ V   + +L  A   AAK+ + +L+E++I GP
Sbjct: 138 -CLQASTE-LGFPLIVKPAHEGSSIGMAKVNSTQ-ELVAAWQDAAKYDSQVLVEQWIHGP 194

Query: 184 ELSVCYLNKSTLPIYTVEFESDFFSYDAKFISTKTNATLTI-LDRSTHQLVTNYCSAIAE 242
           E ++  L    LP   +     F+ YDAK+I   T   +   LD    Q + +  +   +
Sbjct: 195 EFTIAVLRGQVLPPIALGTPHVFYDYDAKYIVNDTQYRIPCGLDSVKEQELIDLTARACD 254

Query: 243 ALELDYFRADFIVHNTEP--YLIELNTLPGLTSHSLFPKACQQHGIEFDKLVLIL 295
           A+ ++ +    ++ + +   +L+E+NT PG+T HSL P A +  G++F +LVL +
Sbjct: 255 AIGIEGWGRLDVMQDEQGRFWLLEVNTAPGMTDHSLVPMAARAAGLDFQQLVLAI 309