Pairwise Alignments

Query, 304 a.a., putative D-alanine--D-alanine ligase from Pseudomonas putida KT2440

Subject, 366 a.a., D-alanine--D-alanine ligase from Dickeya dianthicola ME23

 Score =  113 bits (282), Expect = 8e-30
 Identities = 92/345 (26%), Positives = 154/345 (44%), Gaps = 52/345 (15%)

Query: 5   IAIITGGNSSEREVSLQTSEAVSQSLKTLQISHEILTISDYRE---------LLSLD--- 52
           + ++ GG SSE EVSLQ+++ +  ++   +    +L I    E         LL+ D   
Sbjct: 6   VGVVFGGKSSEHEVSLQSAKNIVDAIDKTRFDVVLLGIDKQGEWHVNDASNYLLNADNPA 65

Query: 53  ------------------------------LAKFTRVFLALHGGFGENGMAQAYLEGLGI 82
                                         L++   +F  +HG  GE+G  Q  L    I
Sbjct: 66  LIALNRSSQNVALIPGQTHHQLIDTTSASALSQIDVIFPIVHGTLGEDGSLQGLLRMANI 125

Query: 83  PYNGPSPQASAICMDKLLTKHIARGLGINVANY--LYSKNGDDVCFEEISERLGTPCIVK 140
           P+ G S   SA+ MDK +TK + R +G+ VA +  L   N     + +++ +LG P  VK
Sbjct: 126 PFVGSSVLGSAVSMDKDVTKRLLRDVGLQVAPFVTLTRANRARHAYGDLTAQLGLPLFVK 185

Query: 141 PNREGCSFGVSLVRDLKADLQPAINAAAKFHTGILIEEFISGPELSVCYLNK---STLPI 197
           P  +G S GVS VR+ +A+ + A+  A ++   +L+E  I G E+    L          
Sbjct: 186 PANQGSSVGVSKVRN-QAEFEQAVALAFRYDHKVLVESAIVGREIECAVLGNDYPKASVC 244

Query: 198 YTVEFESDFFSYDAKFISTKTNATL--TILDRSTHQLVTNYCSAIAEALELD-YFRAD-F 253
             +    +F+SYD K+I+    A      +D   HQ + +      + L+     R D F
Sbjct: 245 GEIVLHDEFYSYDTKYINEDGAAVAIPAAMDDEVHQHIRDIALLAFQTLDCQGMARVDVF 304

Query: 254 IVHNTEPYLIELNTLPGLTSHSLFPKACQQHGIEFDKLVLILNNL 298
           +  + +  + E+NTLPG T+ S++PK  +  G+ +  L+  L  L
Sbjct: 305 LTPDQQVVVNEVNTLPGFTNISMYPKLWEASGLGYTDLITQLIEL 349