Pairwise Alignments

Query, 233 a.a., ABC transporter related from Pseudomonas putida KT2440

Subject, 905 a.a., multidrug ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score = 72.4 bits (176), Expect = 3e-17
 Identities = 68/242 (28%), Positives = 104/242 (42%), Gaps = 23/242 (9%)

Query: 4   LTINNLHFGYSGNPLLNDIELTIKAGELVGILGNNGAGKTTLFDLICKIKKPAKG----- 58
           L    ++  Y     L DI   + AG   G++G +GAGK++L  LI  +KK   G     
Sbjct: 6   LQATGINHRYGQQQALVDITFNLPAGTRCGLIGPDGAGKSSLLGLIAGVKKLQDGQLNVL 65

Query: 59  --AISNLSRRQAYLTQILTPP--------PLLRMNEAGKLITSLTPNASPDHTEILSKLA 108
             AI +   R +   +I   P        P L ++E  +   +L   +  D  + +  L 
Sbjct: 66  GGAIEDRRHRNSLYPRIAFMPQGLGGNLYPELSISENIRFFATLFGLSKADCEQRMHNLL 125

Query: 109 KWSPSLSRRYAEIAKKKAANCSYGEIRSYFTLTLLLLNSDLIILDEPTAGVDPEFRHYIW 168
                LS   A  A + A   S G  +       L+ + DL+ILDEPT GVDP  R   W
Sbjct: 126 -----LSTDLARFADRPAGKLSGGMKQKLGLCCALIHDPDLLILDEPTTGVDPLSRRRFW 180

Query: 169 LGIKSACAE--GASVLIASHYTEEITKNCQRFYMLANKRLEAFDSGGQFMERHHAKSLDE 226
             ++S   E    ++L+A+ Y EE  +  +   ML   +L A     +  +   +  LDE
Sbjct: 181 ELVESVRGERPQLTLLVATAYMEE-AEQFEHCLMLDRGKLIADGLSSELADATPSGKLDE 239

Query: 227 AF 228
           AF
Sbjct: 240 AF 241



 Score = 65.9 bits (159), Expect = 3e-15
 Identities = 54/220 (24%), Positives = 105/220 (47%), Gaps = 12/220 (5%)

Query: 19  LNDIELTIKAGELVGILGNNGAGKTTLFDLICKIKKPAKGAISNLSRRQAYLTQILTPPP 78
           +N +   I  GE+ G LG+NG GKTT   ++  +    +G+ + L         + T   
Sbjct: 284 VNKVSFAIGRGEIFGFLGSNGCGKTTTMKVLTGLMPATEGSATLLGN-PVNAKDLATRKR 342

Query: 79  LLRMNEAGKLITSLTPNASPDHTEILSKLAKWSPS-----LSRRY--AEIAKKKAANCSY 131
           +  M+++  L   L+   +      L  L K         L +R+   ++A++ +     
Sbjct: 343 VGFMSQSFSLYGELSVRQNLVLHAQLFDLPKAESGPRIDELIQRFDLGDVAEQPSGELPL 402

Query: 132 GEIRSYFTLTLLLLNS-DLIILDEPTAGVDPEFRHYIW-LGIKSACAEGASVLIASHYTE 189
           G +R   +L + +L+  +++ILDEPT+GVDP  R   W L I+ +  +G ++ +++H+  
Sbjct: 403 G-LRQRLSLAVAVLHRPEVLILDEPTSGVDPAARDDFWRLLIELSREQGVTIFLSTHFMN 461

Query: 190 EITKNCQRFYMLANKRLEAFDSGGQFMERHHAKSLDEAFI 229
           E  + C R  ++    + A D+      + H  +L+ AF+
Sbjct: 462 E-AQRCDRISLMHAGEVLACDTPDALQRQFHGDTLEAAFV 500