Pairwise Alignments

Query, 233 a.a., ABC transporter related from Pseudomonas putida KT2440

Subject, 906 a.a., ribosome-associated ATPase from Pseudomonas putida KT2440

 Score = 70.9 bits (172), Expect = 8e-17
 Identities = 56/220 (25%), Positives = 111/220 (50%), Gaps = 12/220 (5%)

Query: 19  LNDIELTIKAGELVGILGNNGAGKTTLFDLICKIKKPAKGAISNLSRRQAYLTQILTPPP 78
           +N +   I  GE+ G LG+NG GKTT   ++  +   ++G+ S L R     + + T   
Sbjct: 284 VNKVSFAIGRGEIFGFLGSNGCGKTTTMKVLTGLMPASEGSASLLGR-PVDASDLATRKR 342

Query: 79  LLRMNEAGKLITSLTPNASPD-HTEIL----SKLAKWSPSLSRRY--AEIAKKKAANCSY 131
           +  M+++  L   L+   +   H  +     ++ A+    L  R+  A IA + +     
Sbjct: 343 VGFMSQSFSLYGELSTRQNLALHARLFDLPKAESAQRIDELIERFDLAAIADQPSGALPL 402

Query: 132 GEIRSYFTLTLLLLNS-DLIILDEPTAGVDPEFRHYIW-LGIKSACAEGASVLIASHYTE 189
           G +R   +L + +L+  +++ILDEPT+GVDP  R   W L ++ +  +G ++ +++H+  
Sbjct: 403 G-LRQRLSLAVAVLHRPEVLILDEPTSGVDPAARDDFWRLLVELSREQGVTIFLSTHFMN 461

Query: 190 EITKNCQRFYMLANKRLEAFDSGGQFMERHHAKSLDEAFI 229
           E  + C R  ++   R+ A D+      ++   +L++AF+
Sbjct: 462 E-AQRCDRISLMHAGRVLACDTPDALQHQYQGDTLEDAFV 500



 Score = 57.0 bits (136), Expect = 1e-12
 Identities = 56/224 (25%), Positives = 96/224 (42%), Gaps = 17/224 (7%)

Query: 19  LNDIELTIKAGELVGILGNNGAGKTTLFDLICKIKKPAKGAISNLS---RRQAYLTQILT 75
           L+ +  ++  G    ++G +GAGK+TL  LI  +K+  +G +  L    R++ + T +  
Sbjct: 21  LHPLGFSLPVGTRCALIGPDGAGKSTLLGLIAGVKRLQQGELQVLGGSIRQRRHRTALYP 80

Query: 76  PPPLLRMNEAGKLITSLTPNASPDHTEILSKLAKWSPSLSRRYAEI---------AKKKA 126
               +       L   L+ + +      L  L +      +R A +         A++ A
Sbjct: 81  KVAFMPQGLGNNLYPELSISENIRFFATLFGLGR--RECEQRMANLLQATDLQHFAQRPA 138

Query: 127 ANCSYGEIRSYFTLTLLLLNSDLIILDEPTAGVDPEFRHYIWLGIKSACAE--GASVLIA 184
              S G  +       L+   DL+ILDEPT GVDP  R   W  ++   A+    ++L+A
Sbjct: 139 GKLSGGMKQKLGLCCALIHEPDLLILDEPTTGVDPLSRRRFWELVEQVRAQRPQLTLLVA 198

Query: 185 SHYTEEITKNCQRFYMLANKRLEAFDSGGQFMERHHAKSLDEAF 228
           + Y EE  +  +   ML   RL A     +      +  LD+AF
Sbjct: 199 TAYMEE-AEQFEHCLMLDGGRLLAAGPSHELAAVTSSGKLDDAF 241