Pairwise Alignments

Query, 233 a.a., ABC transporter related from Pseudomonas putida KT2440

Subject, 241 a.a., lipopolysaccharide ABC transporter, subunit LptB from Pseudomonas putida KT2440

 Score = 67.8 bits (164), Expect = 2e-16
 Identities = 65/221 (29%), Positives = 97/221 (43%), Gaps = 17/221 (7%)

Query: 1   MDILTINNLHFGYSGNPLLNDIELTIKAGELVGILGNNGAGKTTLFDLICKIKKPAKGA- 59
           M  L   +L   Y G  ++ D+ L+I +G++VG+LG NGAGKTT F +I  + +  +G  
Sbjct: 1   MATLKAQHLAKSYKGRQVVRDVSLSIDSGQIVGLLGPNGAGKTTCFYMIVGLVQAEQGRV 60

Query: 60  -ISNLS--------RRQAYLTQILTPPPLLR-MNEAGKLITSLTPNASPDHTEILSKLAK 109
            I NL         R +A +  +     + R ++ A  ++  L      D      +L  
Sbjct: 61  LIDNLDVSHQPMHGRARAGIGYLPQEASIFRKLSVADNIMAILETRKDLDRDGRRKELE- 119

Query: 110 WSPSLSRRY--AEIAKKKAANCSYGEIRSYFTLTLLLLNSDLIILDEPTAGVDPEFRHYI 167
              SL + +  + I      + S GE R       L      I+LDEP AGVDP     I
Sbjct: 120 ---SLLQEFHISHIRDNLGMSLSGGERRRVEIARALATAPKFILLDEPFAGVDPISVGDI 176

Query: 168 WLGIKSACAEGASVLIASHYTEEITKNCQRFYMLANKRLEA 208
              I    A+G  VLI  H   E    C+  Y++ + RL A
Sbjct: 177 KQIIHHLKAKGIGVLITDHNVRETLDICETAYIVNDGRLIA 217