Pairwise Alignments

Query, 233 a.a., ABC transporter related from Pseudomonas putida KT2440

Subject, 945 a.a., Ribosome-associated ATPase from Azospirillum sp. SherDot2

 Score = 72.8 bits (177), Expect = 2e-17
 Identities = 71/245 (28%), Positives = 102/245 (41%), Gaps = 27/245 (11%)

Query: 4   LTINNLHFGYSGNPLLNDIELTIKAGELVGILGNNGAGKTTLFDLICKIKKPAKGAISNL 63
           ++++ +   Y G   L D  L I  G  V I+G +G GK+TL  LI   KK  +G++  L
Sbjct: 7   VSLSGVRHRYGGTVALADASLDIAPGTSVAIIGPDGVGKSTLLGLISTAKKIQQGSVRVL 66

Query: 64  SR-------RQAYLTQILTPPPLLRMNEAGKLITSLTPNASPDHTEILSKLAKWSPSLSR 116
                    R A   +I   P  L  N    L  +       ++ +   +L     +  R
Sbjct: 67  GTDVADRHGRAALQPRIAYMPQGLGRNLYADLSVA-------ENLQFFGRLFGLDAAERR 119

Query: 117 R----------YAEIAKKKAANCSYGEIRSYFTLTLLLLNSDLIILDEPTAGVDPEFRHY 166
           R           A    + A   S G  +       LL + DL+ILDEPT GVDP  R  
Sbjct: 120 RRIADLLESTGLAPFPDRPAGKLSGGMKQKLGLCCALLHDPDLLILDEPTTGVDPLSRRQ 179

Query: 167 IW--LGIKSACAEGASVLIASHYTEEITKNCQRFYMLANKRLEAFDSGGQFMERHHAKSL 224
            W  +    A   G +VL+A+ Y +E  +  Q   M A  RL A D+      R  A  L
Sbjct: 180 FWDLIARIRAGRPGMTVLVATSYMDEAERFDQVVMMNAG-RLLAHDTAAALKARTGAADL 238

Query: 225 DEAFI 229
           +EAF+
Sbjct: 239 EEAFV 243



 Score = 68.6 bits (166), Expect = 4e-16
 Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 8/217 (3%)

Query: 19  LNDIELTIKAGELVGILGNNGAGKTTLFDLICKIKKPAKGAISNLSRRQAYLTQILTPPP 78
           ++DI   I  GE+ G LG+NG GKTT   ++  +  PA    + L  R      + +   
Sbjct: 288 VSDISFRIGRGEIFGFLGSNGCGKTTTMKMLTGLL-PASAGEARLFGRPVDAADLESRRR 346

Query: 79  LLRMNEAGKLITSLTPNASPDHTEILSKLAKWSPSLSRRYAEIAKKKAANCSYGE----I 134
           +  M +A  L   LT   + D    L  L      L+            +         +
Sbjct: 347 VGYMAQAFSLYGELTVRQNLDLHARLFDLTDAETRLAALVERFGLSPYVDAVADRLPLGV 406

Query: 135 RSYFTLTLLLLNS-DLIILDEPTAGVDPEFRHYIWLG-IKSACAEGASVLIASHYTEEIT 192
           R   +L + +L+  +L+ILDEPT+GVDP  R   W   I  +  +G ++ +++H+  E  
Sbjct: 407 RQRLSLAVAILHGPELLILDEPTSGVDPVARDQFWRDLIALSRDQGVTIFVSTHFMNEAA 466

Query: 193 KNCQRFYMLANKRLEAFDSGGQFMERHHAKSLDEAFI 229
           + C R   +   R+ A     +   +  A SLD+AFI
Sbjct: 467 R-CDRVAFMNAGRVIAAGPPDELRRQQQADSLDDAFI 502