Pairwise Alignments

Query, 153 a.a., putative phage repressor-like, DNA-binding domain from Pseudomonas putida KT2440

Subject, 148 a.a., putative Cro/CI transcriptional regulator from Pseudomonas putida KT2440

 Score = 59.3 bits (142), Expect = 3e-14
 Identities = 49/154 (31%), Positives = 80/154 (51%), Gaps = 19/154 (12%)

Query: 4   RQSYAAVLRLLRVNRGMTQQDLSGSVTQANISSLELAKSSATVETSAKLAEALNVEPLTL 63
           R + AAV+R LR  +G++Q +L     + ++  LE   S+ ++E   +LA++L V P TL
Sbjct: 4   RHALAAVIRALRAVKGVSQAELPAD--RKHLYKLEAGFSNISLELLVQLAQSLEVAPTTL 61

Query: 64  LALVIASNGNRSAREALQTSLDELDSLGLGDCPLPPVAQPYKPTRELE--------ALR- 114
           + L+ A++ + ++   +     EL   G     L  +A+    TR+LE        A R 
Sbjct: 62  MVLLEATDQSTTSDSIIDRVKAELVEFG----QLGGLAEL---TRQLELGGQQARHAARE 114

Query: 115 -KLQAVQDLKSRGFTQTEAARELEMPASTLRRLW 147
            +  A+Q  K+RG TQ E A EL +  ST+ R W
Sbjct: 115 DRKAAIQACKARGLTQRETAAELALSKSTVARAW 148