Pairwise Alignments

Query, 658 a.a., conserved exported protein of unknown function with YVTN beta-propeller repeat from Pseudomonas putida KT2440

Subject, 329 a.a., putative Outer membrane protein from Pseudomonas putida KT2440

 Score = 78.6 bits (192), Expect = 4e-19
 Identities = 67/257 (26%), Positives = 112/257 (43%), Gaps = 17/257 (6%)

Query: 143 DASLTVIDPTVSVGGVTSTMARIELPGRPMDWAATSDDKQVFVSIPERGKVSVIDTETFT 202
           D SL++ID  +    VT T+    +  RP     + D K +++   +  +V V+D  T  
Sbjct: 39  DNSLSLID--LQTLEVTETLP---VGQRPRGLLLSHDSKLLYICASDSDRVQVMDVATRK 93

Query: 203 RVADLDAGDQPLRVALQPDQHRLWVGNNSSDPAKGGVTVIDVPGRSAMKHFNTGTGHHEI 262
            + +L +G  P + AL P+   L+V N         VTVID      +     G     +
Sbjct: 94  IIKELPSGKDPEQFALHPNDRWLYVSNEDD----ALVTVIDTVTDKVLGQIEVGIEPEGM 149

Query: 263 AFSADSRYAYVSNRDSGTLSVIDIPEMRLAKTIKVGPHPLSVSYSALSQAVYVVDGEEGS 322
           A S D ++A  ++  +  L  ID     LA +  V   P  V +S     ++      G+
Sbjct: 150 AVSPDGKWAVNTSETTNMLHWIDTSTQTLADSTLVDQRPRFVEFSKDGSRLWASAEIGGT 209

Query: 323 VRVFDARSHQLRHTVQAE-QGLGP-------MRFSHDGRYGIVLNTLENQALVIDASTDK 374
           V + D  + Q+  T+  + +G+ P       ++ S DG+Y  V     N   VIDA T  
Sbjct: 210 VTILDVTTRQVLKTLNFQIKGVHPDKVQPVGIKLSADGKYAFVALGPANHVAVIDAKTFD 269

Query: 375 LIHHIPVAAEPYQLTFT 391
           ++ ++ V    +QL FT
Sbjct: 270 VLDYLLVGRRVWQLAFT 286



 Score = 58.5 bits (140), Expect = 4e-13
 Identities = 54/214 (25%), Positives = 89/214 (41%), Gaps = 16/214 (7%)

Query: 133 NSYFLLMLNNDASLTVIDPTVSVGGVTSTMARIELPGRPMDWAATSDDKQVFVSIPERGK 192
           N  +L + N D +L  +  TV+       + +IE+   P   A + D K    +      
Sbjct: 112 NDRWLYVSNEDDALVTVIDTVT----DKVLGQIEVGIEPEGMAVSPDGKWAVNTSETTNM 167

Query: 193 VSVIDTETFTRVADLDAGDQPLRVALQPDQHRLWVGNNSSDPAKGGVTVIDVPGRSAMKH 252
           +  IDT T T         +P  V    D  RLW    +S    G VT++DV  R  +K 
Sbjct: 168 LHWIDTSTQTLADSTLVDQRPRFVEFSKDGSRLW----ASAEIGGTVTILDVTTRQVLKT 223

Query: 253 FNTGT-GHHE-------IAFSADSRYAYVSNRDSGTLSVIDIPEMRLAKTIKVGPHPLSV 304
            N    G H        I  SAD +YA+V+   +  ++VID     +   + VG     +
Sbjct: 224 LNFQIKGVHPDKVQPVGIKLSADGKYAFVALGPANHVAVIDAKTFDVLDYLLVGRRVWQL 283

Query: 305 SYSALSQAVYVVDGEEGSVRVFDARSHQLRHTVQ 338
           +++     +   +G  G V V DA+  ++  +V+
Sbjct: 284 AFTPDQSQLLATNGVSGDVSVIDAKQLKVLKSVK 317



 Score = 52.0 bits (123), Expect = 4e-11
 Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 4/117 (3%)

Query: 271 AYVSNRDSGTLSVIDIPEMRLAKTIKVGPHPLSVSYSALSQAVYVVDGEEGSVRVFDARS 330
           A+VSN    +LS+ID+  + + +T+ VG  P  +  S  S+ +Y+   +   V+V D  +
Sbjct: 32  AWVSNEKDNSLSLIDLQTLEVTETLPVGQRPRGLLLSHDSKLLYICASDSDRVQVMDVAT 91

Query: 331 HQLRHTVQAEQGLGPMRFS--HDGRYGIVLNTLENQALVIDASTDKLIHHIPVAAEP 385
            ++    +   G  P +F+   + R+  V N  +    VID  TDK++  I V  EP
Sbjct: 92  RKI--IKELPSGKDPEQFALHPNDRWLYVSNEDDALVTVIDTVTDKVLGQIEVGIEP 146



 Score = 49.3 bits (116), Expect = 3e-10
 Identities = 40/169 (23%), Positives = 71/169 (42%), Gaps = 8/169 (4%)

Query: 226 WVGNNSSDPAKGGVTVIDVPGRSAMKHFNTGTGHHEIAFSADSRYAYVSNRDSGTLSVID 285
           WV N   +     +++ID+      +    G     +  S DS+  Y+   DS  + V+D
Sbjct: 33  WVSNEKDN----SLSLIDLQTLEVTETLPVGQRPRGLLLSHDSKLLYICASDSDRVQVMD 88

Query: 286 IPEMRLAKTIKVGPHPLSVSYSALSQAVYVVDGEEGSVRVFDARSHQLRHTVQAEQGLGP 345
           +   ++ K +  G  P   +     + +YV + ++  V V D  + ++    Q E G+ P
Sbjct: 89  VATRKIIKELPSGKDPEQFALHPNDRWLYVSNEDDALVTVIDTVTDKVLG--QIEVGIEP 146

Query: 346 --MRFSHDGRYGIVLNTLENQALVIDASTDKLIHHIPVAAEPYQLTFTK 392
             M  S DG++ +  +   N    ID ST  L     V   P  + F+K
Sbjct: 147 EGMAVSPDGKWAVNTSETTNMLHWIDTSTQTLADSTLVDQRPRFVEFSK 195



 Score = 32.7 bits (73), Expect = 3e-05
 Identities = 17/83 (20%), Positives = 41/83 (49%)

Query: 305 SYSALSQAVYVVDGEEGSVRVFDARSHQLRHTVQAEQGLGPMRFSHDGRYGIVLNTLENQ 364
           S   ++   +V + ++ S+ + D ++ ++  T+   Q    +  SHD +   +  +  ++
Sbjct: 24  SSHTMAATAWVSNEKDNSLSLIDLQTLEVTETLPVGQRPRGLLLSHDSKLLYICASDSDR 83

Query: 365 ALVIDASTDKLIHHIPVAAEPYQ 387
             V+D +T K+I  +P   +P Q
Sbjct: 84  VQVMDVATRKIIKELPSGKDPEQ 106