Pairwise Alignments

Query, 397 a.a., putative ABC transporter, substrate-binding protein from Pseudomonas putida KT2440

Subject, 390 a.a., branched-chain amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  654 bits (1686), Expect = 0.0
 Identities = 326/398 (81%), Positives = 356/398 (89%), Gaps = 9/398 (2%)

Query: 1   MRQPAHLALTCLLALAATLATPLAPAAQGQAA-APLHIRIGYLGYRPAAGPLLSNIIPEP 59
           MRQ A  A+ CLLA+A         AA GQAA APL ++IGYLGYRP  GPLLSN+IPEP
Sbjct: 1   MRQLAPYAVICLLAIAW--------AANGQAAEAPLQVQIGYLGYRPDPGPLLSNVIPEP 52

Query: 60  GDAGLQGAELAIVDSNSTGRFLKQQFQLTSANVDSPEALLQAARAQHDQGLRVFVVNAPA 119
            DAG +GAELAI+DSNSTG FL Q++ LT+A VD+P+ALL AA+AQH QGLR+FVVNAPA
Sbjct: 53  ADAGQRGAELAIIDSNSTGAFLNQRYSLTTATVDTPDALLAAAQAQHAQGLRLFVVNAPA 112

Query: 120 ASLRALSAALPDSLLFNAGSPDDSLRSSQCLGNVLHSLPSRAMLADALAQFLVLRKWQRA 179
           ASLR LSAALPDSLLFNAGSPDDSLRS+ CLGNVLH+LPSRAMLADALAQFLV+RKWQ+A
Sbjct: 113 ASLRQLSAALPDSLLFNAGSPDDSLRSTACLGNVLHTLPSRAMLADALAQFLVVRKWQKA 172

Query: 180 LLVVGQTPDDQAYAAALRRSVKRFGVQLVAEKTWTFDNDQRRSAQADMPLFTQTAEYDVV 239
           LL+VG T DDQAYAAALRR+ KRFGVQ VAEK W FDNDQRRSAQADMPLFTQTAEYDVV
Sbjct: 173 LLIVGPTEDDQAYAAALRRAAKRFGVQWVAEKAWRFDNDQRRSAQADMPLFTQTAEYDVV 232

Query: 240 LVADERGDFGEYLPYQTWYPRPVAGTQGLTPTGWHKTVETFGAAQLQKRFEAQAGRWMND 299
           LVADERGDFGEY+PYQTWYPRPVAGTQGLTPTGWHKTVET+GAAQLQKRFEA AGRWMND
Sbjct: 233 LVADERGDFGEYVPYQTWYPRPVAGTQGLTPTGWHKTVETYGAAQLQKRFEALAGRWMND 292

Query: 300 RDFAAWMAVRSVASAASKLRLAEPRALQQLLLSEQLPLDGFKGRKLSYRPWNGELRQPIP 359
           RDFAAWMAVRS+ASA SKLR  EP A++QL +SEQLPLDGFKGRKLSYRPWNG+LRQPIP
Sbjct: 293 RDFAAWMAVRSIASAVSKLRQVEPMAIRQLEISEQLPLDGFKGRKLSYRPWNGQLRQPIP 352

Query: 360 LVQPRALVSTSPQEGFLHPFNEMDSLGYDKPEVTCSYP 397
           +VQPRALVSTSPQ+GFLHP NEMDSLGYDKPEVTC +P
Sbjct: 353 IVQPRALVSTSPQDGFLHPTNEMDSLGYDKPEVTCRFP 390