Pairwise Alignments

Query, 217 a.a., conserved protein of unknown function with rhs repeat-associated core domain from Pseudomonas putida KT2440

Subject, 1589 a.a., type IV secretion protein Rhs from Pseudomonas simiae WCS417

 Score = 75.1 bits (183), Expect = 7e-18
 Identities = 36/74 (48%), Positives = 46/74 (62%)

Query: 12   GYSKRPSKSTLLGFNGERLAVELTSYLLGNGYRAFSPALMRFLSADSFSPFGEGGVNSYA 71
            G ++  +   L G NG+RL V    Y+LG+G RA+ P LM FL AD  SPF EGGVN Y 
Sbjct: 1269 GKARSMADLQLPGINGQRLDVATNLYVLGSGVRAYDPRLMIFLQADPLSPFDEGGVNGYG 1328

Query: 72   FCSNDPVNRQDPSG 85
            + + +P N  DPSG
Sbjct: 1329 YAACNPTNMMDPSG 1342