Pairwise Alignments

Query, 188 a.a., site-specific DNA recombinase from Pseudomonas putida KT2440

Subject, 193 a.a., Serine recombinase, PinQ/PinR-type from Sphingobium sp. HT1-2

 Score = 94.7 bits (234), Expect = 9e-25
 Identities = 60/180 (33%), Positives = 98/180 (54%), Gaps = 8/180 (4%)

Query: 5   YARVSTSGQDLELQRQLLTQSGCA----RIFEEKISG--AKMERPELMRLLDHLRPGDVV 58
           Y RVST  Q  + Q   +  +G      RI  E +SG  A +ER     LL  L  GDV+
Sbjct: 7   YCRVSTIDQTTDNQMLEIAGAGFTVEPQRIIAETVSGSVAAVERKGWQLLLHKLEAGDVL 66

Query: 59  VVSRLDRLARSTIDLLSIAEQLNRLGAGLQSLSEPWLNTTTAAGQMIMTIFAGIASFERS 118
           +V++LDRL R+ +D+    E+L  +G  +  L+   ++ T+AAG+M M++   +A FER 
Sbjct: 67  IVTKLDRLGRNAMDVRQTVERLAAMGVRVHCLALGGVDLTSAAGKMTMSVIIAVAEFERD 126

Query: 119 LIVDRTRAGREAAQRKGIKFGPKPRLSKEQIEHAEMLVVAGKSVAQIAGLLGVHRATLYR 178
           L+V+RT AG + A+ +G   GPK +   + +  A      G +++Q     G+ +A++ R
Sbjct: 127 LLVERTNAGLQRAKAQGKALGPKRKADGQTV--AAWRADRGATISQTMEHFGISKASVMR 184