Pairwise Alignments

Query, 292 a.a., transcriptional regulator HTH, LysR family from Pseudomonas putida KT2440

Subject, 296 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  101 bits (252), Expect = 2e-26
 Identities = 75/248 (30%), Positives = 121/248 (48%), Gaps = 4/248 (1%)

Query: 1   MNLKQLEYALAVADTGSFTRAAERCHVVQSALSHQVARLEAQLGVSLFERSSRRVRLTPA 60
           ++ +QL Y + +AD+GSF+ AAER  V QSALS Q+  LE QL   LFER++R+ RLT A
Sbjct: 2   ISTRQLRYFVEIADSGSFSAAAERLFVAQSALSRQIKELETQLQTPLFERTARQPRLTAA 61

Query: 61  GEAFVLSARPAVEAARRIADDVAAACGQVRGRLAIGEISSL-TALDLVDLLAVFHGRFPD 119
           GEAF   AR  +    + ++         RG L +   S++  +  L+  ++ +  R P 
Sbjct: 62  GEAFYPRARNLLSELLKASEMATQVGNGERGTLRLSHSSTVPMSGPLLQGISTWLERCPG 121

Query: 120 VDVRWLTAKSELLIADVLERRLDVGFIGLWQGEVVQGVQHRLLAREELVAVLPLGHRLA- 178
           V +  +   SE  +  + + RLDVG + L      +GV+   L  E+L+  +P  H LA 
Sbjct: 122 VSMDIVKLSSEAQLEQIADGRLDVGLLRLPVLRQREGVRVVPLYSEQLLLAVPPNHALAR 181

Query: 179 GRAQLALADLAGEVLVDF--PEGTGARRQTDEAFQAVGLQRRVQFEIGHVRLVEKFVQRG 236
             + +AL  L  E  +    P+  G    + E     G   +    +       + +Q G
Sbjct: 182 SHSPIALEQLKDEAFISIPHPQRGGLSYLSAELCMRAGFFPKAARVMSRKTTQLQLIQAG 241

Query: 237 MAVGLVPE 244
             + L+P+
Sbjct: 242 FGIALLPK 249