Pairwise Alignments

Query, 292 a.a., transcriptional regulator HTH, LysR family from Pseudomonas putida KT2440

Subject, 297 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  115 bits (289), Expect = 9e-31
 Identities = 103/300 (34%), Positives = 151/300 (50%), Gaps = 18/300 (6%)

Query: 1   MNLKQLEYALAVADTGSFTRAAERCHVVQSALSHQVARLEAQLGVSLFERSSRRVRLTPA 60
           ++L++L Y L VA+   F RAA R H+ Q  L+ Q++ LE +LG  LF+R+SR V LT  
Sbjct: 2   LDLRKLRYFLTVAEELHFGRAAIRLHLAQPPLTRQISALETELGFKLFDRTSRTVSLTAQ 61

Query: 61  GEAFVLSAR---PAVEAARRIADDVAAACGQVRGRLAIGEISSLTALDLV-DLLAVFHGR 116
           G +F+  AR     VE A+ IA  +AA      G+LA+G +SS+   DL    +  F  R
Sbjct: 62  GRSFLPYARGVLEQVELAQVIAGKLAAG---TAGQLALGYVSSIALSDLFSQAIQAFAQR 118

Query: 117 FPDVDVRWLTAKSELLIADVLERRLDVGFIGLW-QGEVVQGVQHRLLAREELVAVLPLGH 175
           FPDV +  +   S  L A V + RLD+G   L  Q E VQ +    L  E LVA +    
Sbjct: 119 FPDVQLTLVECASGSLGAQVADGRLDLGLSRLLPQDEAVQALS---LGEERLVAAVSSES 175

Query: 176 RLAGRAQLALADLAGEVLVDFPE--GTGARRQTDEAFQAVGLQRRVQFEIGHVRLVEKFV 233
            LA +  + LA L+   L+ FP   G+G  +  ++ ++  G   R+      +  +   V
Sbjct: 176 PLARQPSVNLAQLSAYPLILFPADYGSGLNQSIEQLYRHHGQPLRLGPTGRQITSIIALV 235

Query: 234 QRGMAVGLVPERVAQGI--EGVAVARL--VDAPVRHLYAVWSSSPTPAARAFLDVMEQCL 289
             G  V LVPE   Q +  +GV    L  VDA  + L    +++ +    AFL V+ Q L
Sbjct: 236 AAGQGVALVPE-CTQSLMNKGVTYRPLVEVDACAQLLVLTRTATKSVLVDAFLAVIAQPL 294