Pairwise Alignments

Query, 292 a.a., transcriptional regulator HTH, LysR family from Pseudomonas putida KT2440

Subject, 307 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score =  106 bits (264), Expect = 7e-28
 Identities = 84/249 (33%), Positives = 121/249 (48%), Gaps = 12/249 (4%)

Query: 1   MNLKQLEYALAVADTGSFTRAAERCHVVQSALSHQVARLEAQLGVSLFERSSRRVRLTPA 60
           M L+ L   +AVA+   F RAAER ++ Q  +S  +  +E +LGV LFER+SRR+ +T A
Sbjct: 1   MELRHLRCLVAVAEELHFGRAAERLNLSQPPVSLAIKEMEDELGVVLFERTSRRIAITQA 60

Query: 61  GEAFVLSARP---AVEAARRIADDVAAACGQVRGRLAIGEISSLTALDLVDLLAVFHGRF 117
           GE  +  AR     +E  RR A D AA    + G +A+G IS      L   L  F    
Sbjct: 61  GEEALRDARAVLGGLETLRRRAQDAAAG---IMGSIAVGFISLPAYTFLPPTLRRFTEHH 117

Query: 118 PDVDVRWLTAKSELLIADVLERRLDVGFIGLWQGEVVQGVQHRLLAREELVAVLPLGHRL 177
           P   V      +E ++ADV   RLDVG + L   E+   +  RL+ ++ L+  LP  H L
Sbjct: 118 PKASVALREGITEQIVADVESGRLDVGLV-LQPAEMPATLGSRLVQKDVLILALPEAHPL 176

Query: 178 AGRAQLALADLAGEVLVDFPEGTGARRQTDEAFQAVGLQR---RVQFEIGHVRLVEKFVQ 234
           A    +AL + AGE  + F    G   Q  +A     ++R    + F    +  +   V 
Sbjct: 177 ARPGNVALENFAGERFLGFERHIGP--QMFDAIVTTCMRRGFSPLMFPARQMNTIVSLVS 234

Query: 235 RGMAVGLVP 243
            G+ V LVP
Sbjct: 235 GGVGVALVP 243