Pairwise Alignments

Query, 292 a.a., transcriptional regulator HTH, LysR family from Pseudomonas putida KT2440

Subject, 299 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score =  128 bits (322), Expect = 1e-34
 Identities = 96/278 (34%), Positives = 128/278 (46%), Gaps = 6/278 (2%)

Query: 1   MNLKQLEYALAVADTGSFTRAAERCHVVQSALSHQVARLEAQLGVSLFERSSRRVRLTPA 60
           M L+ L Y   +A+   F RAA R  + Q  LS  + +LE  +G  LFER+S+ VRLTPA
Sbjct: 1   MELRHLRYFSVLAEELHFGRAARRLSISQPPLSVAIRQLEDTVGARLFERNSKEVRLTPA 60

Query: 61  GEAFVLSARPAVEAARRIADDVAAACGQVRGRLAIGEISSLTALDLVDLLAVFHGRFPDV 120
           GEA  +SAR  +  A   A +         GRL IG + ++    L   L  F  + P V
Sbjct: 61  GEALRISARRVLLQAEEAAVEARDVALGSAGRLRIGFVGAMLYRGLPQALRAFQAKHPAV 120

Query: 121 DVRWLTAKSELLIADVLERRLDVGFIGLWQGEVVQGVQHRLLAREELVAVLPLGHRLAGR 180
            +      S + I ++L  RLD+GF       V   +QHRLL  E  VA LP GH LA +
Sbjct: 121 RITLSEVNSGVQITELLNDRLDLGF--AHTRRVPLELQHRLLLSEPFVACLPAGHALARK 178

Query: 181 AQLALADLAGEVLVDFPEGTGA--RRQTDEAFQAVGLQRRVQFEIGHVRLVEKFVQRGMA 238
             LA ADL  +  V F          +        G    V+ E+ H   V   V +G+ 
Sbjct: 179 RVLAPADLRAQPFVLFSREVSPDYHERILSICADAGFLPEVRHEVRHWLAVVSLVSQGLG 238

Query: 239 VGLVPERVAQGIEGVAVARLVDAPV--RHLYAVWSSSP 274
           V LVP+ +       AV R +D  V     Y VW S P
Sbjct: 239 VALVPQAMRNSALRGAVFRPLDRAVAQSEAYGVWRSGP 276