Pairwise Alignments

Query, 670 a.a., transposase from Pseudomonas putida KT2440

Subject, 787 a.a., no description from Variovorax sp. SCN45

 Score = 48.9 bits (115), Expect = 9e-10
 Identities = 83/388 (21%), Positives = 145/388 (37%), Gaps = 42/388 (10%)

Query: 185 TKLGRPS---RKGK--RHGYRCDAEMQQRLLKGFLANKSPHKTQNKIYSDILTGEF-GCN 238
           TK GR     R+GK   +GY+C A+ ++ L +G+   K    ++ + Y       + G  
Sbjct: 200 TKPGRQRDAVRRGKSTNNGYKCTAQDRRWLARGWRTYKKAGVSERRAYLLTCLDHWPGNE 259

Query: 239 AYKLAGEAVEYRHPQGMPFPSFPQFRYWISKLISAKQLRIALKGAHRARAQSGSEGSFAD 298
           A K  GE      PQ M  PSF QFR    K   A   R+ +        +    G+  D
Sbjct: 260 AVKETGERFLLA-PQLMR-PSFRQFRSAALKE-KADATRVNMGERVFKECRRALRGTAKD 316

Query: 299 NLINVSQRIEFDGYNISEK-LSGLTEGSAVDSFCVVRAVCALSGMVLGIGFSEGKENMAA 357
           N++   Q +  D  +  +  +S       + S          +  + G+       +   
Sbjct: 317 NVVLAGQLVLIDSTSEDQTPVSRFNINDVLPSTWRTVVFDVKTEYIFGVYSGFESPSTLT 376

Query: 358 YRMAIYCMACDKVKFCEQYGIEISAEEWPSAGLSGSMVLDRGPAAGYEVDPEIHWLK-SV 416
             +A+      K++FC ++ + I   EW    ++  +  D G          ++  + ++
Sbjct: 377 SLLALNNAGTPKIEFCARHNVSIVEGEWHHR-VAKRVRADNGELKSMNGIRTLNTAEVTI 435

Query: 417 DLAPVYSGQSKATVESSHPR-----------------------DKKTLGQPTYFHSKLDF 453
           +    YSG SK  +E+ H                         DK      T+F + ++F
Sbjct: 436 EFVRSYSGSSKGLLEAHHRSAHAHADHQNVGSTLGKKRGRGEPDKNKSASRTHF-TNMEF 494

Query: 454 VQMAKREIVRVLKDNHTSDAGLRMDEEMILAGIKPTPHDIYCYWSMRGRDSSIGVPFDTA 513
           V      I  +L+ N+       +  EM    ++PT   IY +   RG  +S     D  
Sbjct: 495 V------IRSILRHNNEVPVPHLLTVEMRQENVQPTRRAIYEWHVNRGYAASEPQNLDDL 548

Query: 514 VRQFLDVRPAAIRKDGVYFYGRKYRSRE 541
             Q L    A + +DGVY +  ++   E
Sbjct: 549 RSQCLPRLEAVLHRDGVYLFDPRFGHHE 576