Pairwise Alignments

Query, 511 a.a., transposase from Pseudomonas putida KT2440

Subject, 583 a.a., Mobile element protein from Variovorax sp. SCN45

 Score =  427 bits (1098), Expect = e-124
 Identities = 232/532 (43%), Positives = 321/532 (60%), Gaps = 29/532 (5%)

Query: 9   QMTPEQLRALAA--QAL-QLQSQVEAMSRKIQNDEILIEQFKFEIALLKRHKFAKRSEQI 65
           Q   E  R LA   QAL +  + ++   R+I   E  IE+  FE+A LKR KF  +SE +
Sbjct: 47  QQLAEHGRVLAQRDQALAERDALLQRKDREIALREAKIEKITFELARLKRWKFGAKSEAM 106

Query: 66  SPAQGSLLDDLLDTDLEAIEAELKQLLPASSQAE------------PRQSPKRAPLPPQF 113
           +  Q  L ++ L  D   +  +L++L   ++ A             P + P+R P P   
Sbjct: 107 NAEQRRLFEETLAEDEAGLREQLERLRREAAAAAAAAAASDTTTKAPSRRPRRNPFPDHL 166

Query: 114 PRAVIRHEPENTQC---ACGCQLQRIGEDVSEKLDYTPGVFTVEQHVRGKWACRQCETLI 170
            R    HEPE T C    CG  + RIG++VSE+LD  P  F V +H+ GKWACR C+ L 
Sbjct: 167 RRVEHHHEPERTDCLEPGCGRPMTRIGQEVSERLDIVPAEFFVHRHIYGKWACRCCQVLR 226

Query: 171 QAPVPAQVIDKGIPTAGLLAHVMVAKFADHLPLYRQEKILGRAGLAIARSTLAQWVGQTG 230
           QAP  A+VI+ GI  +G +AH ++++F DH+P YRQ  I  R+G+   RSTLA   GQ G
Sbjct: 227 QAPSVAEVIEGGIAASGFVAHTLISRFVDHMPYYRQTTINARSGVHTPRSTLASITGQAG 286

Query: 231 VRLQPLVDALREAVLKQGVIHADETPVQMLAPGEKKTHRAYVWAYSTTPFSALNAVVYDF 290
             LQPL +A R  +L   V+HADETPV +L PG  KT RAYVWAY+ +    +  V+Y+F
Sbjct: 287 AALQPLHEAHRRFILSCAVLHADETPVSLLDPGAGKTRRAYVWAYARSWHDKVPGVIYEF 346

Query: 291 SPSRAGEHARNFLGD-------WSGKLVCDDFAGYKAGFEQGITE----IGCMAHARRKF 339
            P R  ++   FLG        WSG L+ D ++ Y+   +  +        C AHARR F
Sbjct: 347 CPGRGAQYPLAFLGGRERHGRRWSGTLLSDRYSAYETVVDPRLYPDRLGAACAAHARRNF 406

Query: 340 FDLHVANKSQLAEQALHSISGLYEVERQAREMSDEDRWRIRQELAVPISKTLHEWMLAQR 399
            +L     S +  +A+   + +Y VE Q +++SD+DR   RQ+LA P+ + L  W+  +R
Sbjct: 407 EELTHDGTSVVGLEAVRRFARIYGVEAQLQDLSDDDRRAQRQQLARPLWEELKHWLQLER 466

Query: 400 DLVPNGSATAKALDYSLKRWVALTRYLDDGSVPIDNNQVENQIRPWALGRSNWLFAGSLR 459
            LV +G  TAKA+DY+L  W ALTR+L+DG+V IDNN +E QI+PWA+GR  W+F GS  
Sbjct: 467 RLVADGGPTAKAIDYTLGHWTALTRHLNDGAVAIDNNHLERQIKPWAMGRRAWMFVGSEL 526

Query: 460 SGKRAAAIMSLIQSARMNGHDPYAYLKDVLTRLPTQRASEIGQLLPHQWVSA 511
           +G+RAA +MSL+QSAR+NGHDP+AYL+DVL RLPTQRAS+I  LLPH+W  A
Sbjct: 527 AGQRAAIVMSLVQSARLNGHDPWAYLRDVLQRLPTQRASQIEDLLPHRWQPA 578