Pairwise Alignments

Query, 511 a.a., transposase from Pseudomonas putida KT2440

Subject, 510 a.a., Mobile element protein from Variovorax sp. SCN45

 Score =  639 bits (1649), Expect = 0.0
 Identities = 311/509 (61%), Positives = 386/509 (75%), Gaps = 16/509 (3%)

Query: 6   NLDQMTPEQLRALAAQALQLQSQVEAMSRKIQNDEILIEQFKFEIALLKRHKFAKRSEQI 65
           +LD ++ EQLR L A+ +           ++++   L+E+   E ALLKR KFA +SE+ 
Sbjct: 7   SLDSLSAEQLRELTARLMV----------QVRHQSALLEKLTHENALLKRMKFAAQSERF 56

Query: 66  SPAQGSLLDDLLDTDLEAIEAELKQLLPASSQAEP-RQSPKRAPLPPQFPRAVIRHEPEN 124
           +P Q SLL+D ++ DL A+ +E+  L    + A P ++  KR PLP   PR  +RHEP +
Sbjct: 57  NPEQKSLLEDEIEADLAAVASEIDALTQTQAPATPDKKQAKRLPLPAHLPRREVRHEPAS 116

Query: 125 TQCACGCQLQRIGEDVSEKLDYTPGVFTVEQHVRGKWACRQCETLIQAPVPAQVIDKGIP 184
           T CACGCQ++R+GEDV+EKLDY PGVF+VE+H+RGKWAC +CE++ QAPV A VIDKGIP
Sbjct: 117 TTCACGCQMKRVGEDVAEKLDYMPGVFSVERHIRGKWACARCESITQAPVEAHVIDKGIP 176

Query: 185 TAGLLAHVMVAKFADHLPLYRQEKILGRAGLAIARSTLAQWVGQTGVRLQPLVDALREAV 244
           T GLLA V+V K+ADHLPLYRQE I GRAGLAI RSTLAQWVG  GVRLQPLVDAL+  +
Sbjct: 177 TTGLLAQVLVGKYADHLPLYRQEAIFGRAGLAIPRSTLAQWVGTCGVRLQPLVDALKTEI 236

Query: 245 LKQGVIHADETPVQMLAPGEKKTHRAYVWAYSTTPFSALNAVVYDFSPSRAGEHARNFLG 304
           L   V+HADETPV ML PG+ KTHRAY+WAY+   F ++ AVVYDF  SR+GEHAR+FLG
Sbjct: 237 LGHRVLHADETPVAMLKPGDGKTHRAYLWAYAPGAFESIKAVVYDFCESRSGEHARHFLG 296

Query: 305 D-----WSGKLVCDDFAGYKAGFEQGITEIGCMAHARRKFFDLHVANKSQLAEQALHSIS 359
                 W G L CDDF+GYKA    G+TE+GC+AHARRKFFDLH AN+SQ+AE AL   +
Sbjct: 297 HGTDKAWKGSLTCDDFSGYKALIASGVTEVGCLAHARRKFFDLHAANQSQIAEFALQQFA 356

Query: 360 GLYEVERQAREMSDEDRWRIRQELAVPISKTLHEWMLAQRDLVPNGSATAKALDYSLKRW 419
            +YE+ER+ +E+  E R  +RQ+   PI   LHEWM  QR  VP+GSATAKALDYSL+RW
Sbjct: 357 RVYEIEREVKELGSEQRQAVRQQQTRPILDALHEWMTLQRRQVPDGSATAKALDYSLRRW 416

Query: 420 VALTRYLDDGSVPIDNNQVENQIRPWALGRSNWLFAGSLRSGKRAAAIMSLIQSARMNGH 479
            ALTR+ DDG +P+DNN +ENQIRP A+GR+NWLFAGSLR+G+RAAA+MSLIQSARMN H
Sbjct: 417 DALTRFADDGQLPVDNNWIENQIRPIAIGRNNWLFAGSLRAGQRAAAVMSLIQSARMNEH 476

Query: 480 DPYAYLKDVLTRLPTQRASEIGQLLPHQW 508
           DPYAYLKDVLTRLPT +AS I +LLPH+W
Sbjct: 477 DPYAYLKDVLTRLPTHKASRIDELLPHRW 505