Pairwise Alignments

Query, 490 a.a., Probable copper RND efflux membrane fusion protein, CzcB family from Pseudomonas putida KT2440

Subject, 439 a.a., efflux RND transporter periplasmic adaptor subunit from Rhodanobacter sp000427505 FW510-R12

 Score =  260 bits (665), Expect = 6e-74
 Identities = 162/397 (40%), Positives = 220/397 (55%), Gaps = 21/397 (5%)

Query: 28  AQPAQAP--AIATEQKPLYWYDPMYPQQHFPAPGKSPFMDMQLVAKYAEEGTDPAEPAVQ 85
           A PA  P  + A+ ++ LYWYDPM P QHFP PGKSP M M++V KYA++G       V+
Sbjct: 33  AAPAGTPVSSSASAKEILYWYDPMEPAQHFPKPGKSP-MGMEMVPKYADDGEQAG--GVR 89

Query: 86  ISQGVQQNLGVRLATVSRGRLQRTLQVSGVLAFDERDFSVLQARTAGFVERTYGRATGDV 145
           I  G  QNLG+R   V R  L   + V G + ++ R+ + + AR    + + + RA    
Sbjct: 90  IDPGTVQNLGIRTTPVERRVLSTAVWVPGTVTWNPREATTVSARVDAVINKLWVRAPYTQ 149

Query: 146 VAKGAPLADVLAPEWAGLQEEFLALRHLGDVQ---LLAAARQRLLLAGMPGELVDRVARS 202
           V  G PLA++LAP+W     E+ AL+         L  AAR+RL + G+    + R AR 
Sbjct: 150 VTAGEPLAELLAPQWGSALAEYDALQGAQSADAKALRVAARERLRVLGLTAAEI-RTARR 208

Query: 203 GKVQNQVTLVAPSAGVIQALDLRPGMTVTPGATLARINGIANVWLEAAVPEAQASGLHEG 262
           G     +TL AP  G++ AL+++ G  V  G TL  +N +A VW+EAA+P+A A  +H G
Sbjct: 209 G-AGAAITLDAPQTGMVTALEVQEGQRVGAGQTLMTLNSLATVWVEAALPQAVAGTVHSG 267

Query: 263 QAVEAHLPAYPGETVQGKLTALLADADLQSRTLRLRIELPNKDGRLRPGMTAQVSLRPGE 322
             V     A PG+  QG +  LL D D  +RT R RI L N   +L PGM   V L P  
Sbjct: 268 TPVTVSADALPGQVFQGSVETLLPDLDNATRTQRARIVLANPRAQLSPGMFVTVQLNP-V 326

Query: 323 NADDSLLLPAEAVIRTGKRDLVMVAEDQGRFRPIEVVLGQENGGQVAILKGLQAGQKVVA 382
             +   ++P++A+I TG +  V+VAE  GRFRP+ V  G+   G   IL GLQ G+KVV 
Sbjct: 327 AGEAVAVVPSDALIATGVQTRVIVAEADGRFRPLAVRTGRSADGYTEILDGLQGGEKVVV 386

Query: 383 SGQFLIDSEASLKG----------IEATTASDSPPAS 409
           SGQFLIDSEASL G          + A   S S PA+
Sbjct: 387 SGQFLIDSEASLSGALERLGEGGTVPAAATSASQPAT 423