Pairwise Alignments

Query, 490 a.a., Probable copper RND efflux membrane fusion protein, CzcB family from Pseudomonas putida KT2440

Subject, 373 a.a., Multidrug resistance protein MdtE from Xanthobacter sp. DMC5

 Score =  101 bits (251), Expect = 5e-26
 Identities = 64/218 (29%), Positives = 110/218 (50%), Gaps = 7/218 (3%)

Query: 198 RVARSGKVQNQVTLVAPSAGVIQALDLRPGMTVTPGATLARINGIANVWLEAAVPEAQAS 257
           +VA    V  + TL AP +G +    +  G  V+ G T+  +  +  ++++  +P+   +
Sbjct: 153 QVAEQQAVVEKKTLKAPFSGRLGIRSVDLGQYVSAGTTVVTLQSLNPIFIDFYLPQQALA 212

Query: 258 GLHEGQAVEAHLPAYPGETVQGKLTALLADADLQSRTLRLRIELPNKDGRLRPGMTAQVS 317
            +  GQ V+A +  YPG+  +G +TA+    D+ SR ++LR E  N D RL PGM A V 
Sbjct: 213 EVKAGQTVKATVDTYPGQAFEGTVTAISPKVDVTSRNVQLRAEFRNDDHRLTPGMFATVE 272

Query: 318 LRPGENADDSLLLPAEAVIRTGKRDLVMVAEDQG------RFRPIEVVLGQENGGQVAIL 371
           +  G   D  + +P  A++     D+V V E +         R + V  G   G Q+A+L
Sbjct: 273 VAVG-TPDAFVTVPQTAIMANPYGDIVFVVEKKEGSATGLAARQVFVKTGATRGDQIAVL 331

Query: 372 KGLQAGQKVVASGQFLIDSEASLKGIEATTASDSPPAS 409
            G++AG +VVA+GQ  + + + +    A   ++ P  S
Sbjct: 332 SGIKAGDQVVAAGQMKLHNGSLVSVNNAVLPANDPAPS 369