Pairwise Alignments

Query, 490 a.a., Probable copper RND efflux membrane fusion protein, CzcB family from Pseudomonas putida KT2440

Subject, 398 a.a., hypothetical protein from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  181 bits (458), Expect = 5e-50
 Identities = 125/357 (35%), Positives = 180/357 (50%), Gaps = 14/357 (3%)

Query: 48  PMYPQQHFPAPGKSPFMDMQLVAKYAEEGTDPAEPAVQISQGVQQNLGVRLATVSRGRLQ 107
           PM+PQ     PG  P   M LV   A+ G D  E  +  SQ    N  ++   V  G + 
Sbjct: 36  PMHPQVVQSEPGICPICHMDLVP-VAQNGADKGELMLSESQIALGN--IKTKRVKLGDVS 92

Query: 108 RTLQVSGVLAFDERDFSVLQARTAGFVERTYGRATGDVVAKGAPLADVLAPEWAGLQEEF 167
               ++G L  DE    V+ +R  G VE+ Y + TG  V KG PL ++ + E   LQ E+
Sbjct: 93  SNTILTGKLVLDETQTDVISSRAQGRVEKLYIKETGQTVQKGQPLYELYSEELLTLQREY 152

Query: 168 LAL----RHLGD-----VQLLAAARQRLLLAGMPGELVDRVARSGKVQNQVTLVAPSAGV 218
           L      + LG+        L AAR++LLL G+    +  +AR+G +  +VT VAP+AGV
Sbjct: 153 LLALKQNQELGEENPRFASFLEAARKKLLLYGLTESQIRSLARTGSLDARVTFVAPTAGV 212

Query: 219 IQALDLRPGMTVTPGATLARINGIANVWLEAAVPEAQASGLHEGQAVEAHLPAYPGETVQ 278
           I  +    G  V  GA L R+  +  +W+EA +   + + +  G  V   +  +  E V 
Sbjct: 213 ITDVAAAEGQYVAEGAVLYRVGKLGKIWVEAELYPQEVANVQAGDEVLVSVQGFAEEAVP 272

Query: 279 GKLTALLADADLQSRTLRLRIELPNKDGRLRPGMTAQVSLRPGENADDSLLLPAEAVIRT 338
             +T +  +    S+   LR ELPNK+ +  PGM A VSL PG+N  D L+LP +AVI+ 
Sbjct: 273 ASVTFISPEYRQGSQVAVLRAELPNKNEQYLPGMQANVSL-PGKNGSD-LVLPNDAVIQD 330

Query: 339 GKRDLVMVAEDQGRFRPIEVVLGQENGGQVAILKGLQAGQKVVASGQFLIDSEASLK 395
                V V   +  FR   V +G+E+   VAIL G+Q   KVV SG +L+ SE  LK
Sbjct: 331 ASGSHVWVQTGKNTFRARMVTIGEESADNVAILSGIQENDKVVTSGAYLLYSEFVLK 387