Pairwise Alignments

Query, 490 a.a., Probable copper RND efflux membrane fusion protein, CzcB family from Pseudomonas putida KT2440

Subject, 575 a.a., RND family efflux transporter, MFP subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  122 bits (307), Expect = 3e-32
 Identities = 93/358 (25%), Positives = 160/358 (44%), Gaps = 10/358 (2%)

Query: 49  MYPQQHFPAPGKSPFMDMQLVAKYAEEGTDPAEPAVQ-ISQGVQQNLGVRLATVSRGRLQ 107
           M+PQ     PG  P   M LV       ++   P V  +S        +  +TV  G   
Sbjct: 41  MHPQIKQNEPGDCPICGMDLVPLSTLGDSEDTNPYVMTMSPEAVALANIATSTVKAGSEM 100

Query: 108 RT--LQVSGVLAFDERDFSVLQARTAGFVERTYGRATGDVVAKGAPLADVLAPEWAGLQE 165
            +  L +SG +  DER+   + A   G ++  Y   TG  V +G  LA + +P+      
Sbjct: 101 ASNHLTLSGTIEVDERNVKSVSANFDGRIDDLYVAFTGQEVKQGQRLARIYSPDLIAAHR 160

Query: 166 EFLALRHLGDV--QLLAAARQRLLLAGMPGELVDRVARSGKVQNQVTLVAPSAGVIQALD 223
           E L  +    +  +L  AA+Q+L    +    + ++A     Q    + A ++GV+    
Sbjct: 161 ELLEAKKATGISPKLYEAAKQKLKQWQLTDAQITKMANDEDYQPHFDIYAATSGVVTDRK 220

Query: 224 LRPGMTVTPGATLARINGIANVWLEAAVPEAQASGLHEGQAVEAHLPAYPGETVQGKLTA 283
           +  G  V+ G  L  I  +  VW+     E     +  G  ++  + A PGE    K+  
Sbjct: 221 VAAGDYVSRGQVLFEITNLNKVWVMLDAYEQGLGQISAGDQIQFSVNALPGEEFSAKVAF 280

Query: 284 LLADADLQSRTLRLRIELPNKDGRLRPGM--TAQVSLRPGENADDSLLLPAEAVIRTGKR 341
           +       SR+ ++R E+ N  G+L+PGM  TA++S +     D  +++P  +++ TG+R
Sbjct: 281 IDPVVSADSRSAKVRAEVNNFSGKLKPGMFVTAKLSTQDEAPVDAGVMVPKSSILWTGRR 340

Query: 342 DLV---MVAEDQGRFRPIEVVLGQENGGQVAILKGLQAGQKVVASGQFLIDSEASLKG 396
            +V   + +E +  F  ++V LG   G    +L GL  G ++V +G F +D  A L G
Sbjct: 341 SVVYRQVGSEMKPAFEMVQVELGPVAGEMQQVLTGLSPGDQIVTNGVFAVDGAAQLSG 398