Pairwise Alignments

Query, 490 a.a., Probable copper RND efflux membrane fusion protein, CzcB family from Pseudomonas putida KT2440

Subject, 672 a.a., Cation efflux system protein CusB precursor from Alteromonas macleodii MIT1002

 Score =  234 bits (598), Expect = 5e-66
 Identities = 146/447 (32%), Positives = 226/447 (50%), Gaps = 15/447 (3%)

Query: 39  EQKPLYWYDPMYPQQHFPAPGKSPFMDMQLVAKYAEEGT-DPAEPAVQISQGVQQNLGVR 97
           E++PLYW  PM P      PGKSP M M L+  Y E  + D     + I+  V+ NLGVR
Sbjct: 40  EKQPLYWVAPMDPNYRRDEPGKSP-MGMDLIPVYEESSSGDAGSGTITIAPNVENNLGVR 98

Query: 98  LATVSRGRLQRTLQVSGVLAFDERDFSVLQARTAGFVERTYGRATGDVVAKGAPLADVLA 157
            A V R  L   ++  G + ++E     +  R  G++E  + +A+G+ V KG PL  + +
Sbjct: 99  TAKVQRRALHVPIRTVGYVQYNEETLIHVHPRVEGWIETLHVKASGEYVKKGEPLYSLYS 158

Query: 158 PEWAGLQEEFLALRHLGDVQLLAAARQRLLLAGMPGELVDRVARSGKVQNQVTLVAPSAG 217
           PE    QEE L      +  L+ AAR RL    +P ++V+ + ++  VQ  VT  AP  G
Sbjct: 159 PELVNAQEELLLAMRRNNKDLIVAARSRLNALQVPEDVVETLTKTKNVQQTVTFSAPQTG 218

Query: 218 VIQALDLRPGMTVTPGATLARINGIANVWLEAAVPEAQASGLHEGQAVEAHLPAYPGETV 277
            +  L++R G  + PG T+  I  +  VW++A V E Q + + EG  V   L   PG+T 
Sbjct: 219 FVDNLNIREGFFIKPGVTVMSIGALDEVWVDAEVFERQTAQIVEGLPVTMTLDFLPGKTW 278

Query: 278 QGKLTALLADADLQSRTLRLRIELPNKDGRLRPGMTAQVSLRPGENADDSLLLPAEAVIR 337
           QG +  +    +  +RTLR+R+   N+D  L+P M AQV++   +    +L++P EAVIR
Sbjct: 279 QGVVDYVYPTLEQSTRTLRVRLRFANQDYTLKPNMFAQVTIH-SDMDSTNLIVPTEAVIR 337

Query: 338 TGKRDLVMVAEDQGRFRPIEVVLGQENGGQVAILKGLQAGQKVVASGQFLIDSEASLKGI 397
           TG ++ V++A   G+F+ + + +G+       +L+GL  G  +V S QF++DSE+S+   
Sbjct: 338 TGNQNRVVLALGDGKFKSVAIKIGRVVDEFTEVLEGLIDGDSIVTSAQFMLDSESSI--- 394

Query: 398 EATTASDSPPASQAPEPELHQADGRV----VQIEGTQLTIDHGPFVTLGMPGMTMTFPVA 453
                S      + PE  L      V    V      +T  HGP      P MTM F VA
Sbjct: 395 -----SSDFKRMEPPEESLTSVFTEVMITDVMPSHNMITAKHGPIPEWDWPPMTMDFVVA 449

Query: 454 DPALVNGLKVGDRIRFGIRERDDGMII 480
           +   +  +K G      I ++ DG  +
Sbjct: 450 EHINLATVKGGSSAHIEISKQTDGQYV 476



 Score = 37.7 bits (86), Expect = 1e-06
 Identities = 25/99 (25%), Positives = 44/99 (44%), Gaps = 7/99 (7%)

Query: 382 ASGQFLIDSEASLKGIEATTASDSPPASQAPEPELHQADGRVVQIEGTQLTIDHGPFVTL 441
           +SG++L+ +   ++   + T       S A +    QA    V     QL+++H P    
Sbjct: 557 SSGEYLVSTIHVVEEASSET-------STAVDAVWTQATVNAVMSASNQLSLEHDPIEAW 609

Query: 442 GMPGMTMTFPVADPALVNGLKVGDRIRFGIRERDDGMII 480
             P MTM F VA+   ++ +  G R+   I +  DG  +
Sbjct: 610 DWPAMTMDFNVANEVDLSDITAGMRLHIEITKTQDGAYV 648



 Score = 27.3 bits (59), Expect = 0.002
 Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 1/59 (1%)

Query: 431 LTIDHGPFVTLGMPGMTMTFPVADPALVNGLKVGDRIRFGIRERDDG-MIIEQINALED 488
           + +DH        P MTM F VAD   ++ L  G      I +   G  ++  I+ +E+
Sbjct: 513 INVDHPAIKEWDWPAMTMDFNVADNITLSDLASGTLAHIEISKSSSGEYLVSTIHVVEE 571