Pairwise Alignments

Query, 417 a.a., metal RND efflux outer membrane protein, CzcC family from Pseudomonas putida KT2440

Subject, 454 a.a., Cobalt/zinc/cadmium efflux RND transporter, outer membrane protein CzcC from Variovorax sp. SCN45

 Score = 68.9 bits (167), Expect = 3e-16
 Identities = 107/390 (27%), Positives = 161/390 (41%), Gaps = 47/390 (12%)

Query: 27  ANSLTLDDALQLAERNAPSLQARQEQASAARHSVVPAGELPDPRLNLGVQNLPVDGSDRW 86
           A  LTL  A+ +A R  P L A   +  A   ++V AG  P+P L+  +++L  D     
Sbjct: 52  AGPLTLRSAVAMALRANPGLAAASREQDATEAAIVQAGAWPNPTLDAQLEDLRRD----- 106

Query: 87  STNRDFMTMQVVGLSQEVPNRDKRKARVETAQATVERADAEALFERLKVRAATAQAWITA 146
             NR   T+Q   LSQ +    KR ARV  A+   ++A +     R ++RA+T  A+   
Sbjct: 107 --NRT-TTLQ---LSQPIELGGKRAARVTAAERARDQAASALAGRRAEIRASTITAFFDV 160

Query: 147 YTLQRKLQQFDMLFNENRLLAAAVRARLAAGG-GASADALAPGQEAAQLEE--QKDQLLT 203
            T Q +L+         +    A   R+AAG      +  A   EA    E  Q +  L 
Sbjct: 161 LTAQERLRLAQDSVGLAQTATRAATNRVAAGKVSPLEETRARVAEAGTRVELLQAEGTLR 220

Query: 204 QATQARAALKRWIGQDA--DAQAPAFPQWPVRAP--DYLHTLHAHPEL--AAYGAMTREA 257
            A Q  AAL  W   D        A  Q P  AP  +    L A P +  A      R+A
Sbjct: 221 SARQQLAAL--WGNPDPRFTQVEGAVDQLPAMAPAQNLGVRLAAAPVVVQARLEVERRKA 278

Query: 258 QAQVQQAI----------AEKKSDWGWQVDYQRRGPEFSNMVSVQVSFQLPLFSGSRQDP 307
            + ++QA           A++      +V   RR     N V V +S  LP+F  +R + 
Sbjct: 279 LSDLEQAKRIPDVTVSLGAKRVPASDGEVGGSRR-----NQVVVGLSVPLPIFDTNRGN- 332

Query: 308 MIAARRAQVRQLEDEQEAALREHTAQLEADLAEYQRLQRAVTRSRDTL----LPLAEQRV 363
            +A   ++  +  D+  AA      QL  ++A+     R+   + +TL    LP AE   
Sbjct: 333 -VAEALSREEKARDDLAAA----ELQLGTEVAQATERLRSARATAETLQHDALPGAETAY 387

Query: 364 SLALADYRAGKSALEEVLTARRQRVEARLQ 393
             A   +  GK +  E L A+R   + R Q
Sbjct: 388 KAATKGFELGKFSFLEALDAQRTLFQVRAQ 417