Pairwise Alignments

Query, 417 a.a., metal RND efflux outer membrane protein, CzcC family from Pseudomonas putida KT2440

Subject, 451 a.a., Copper/silver efflux RND transporter, outer membrane protein CusC from Variovorax sp. SCN45

 Score =  217 bits (552), Expect = 6e-61
 Identities = 146/414 (35%), Positives = 213/414 (51%), Gaps = 18/414 (4%)

Query: 10  RMLAAALVLLLPALSAQANS---LTLDDALQLAERNAPSLQARQEQASAARHSVVPAGEL 66
           R+ A  L L    L   A++   L+LD AL+ AE  +  L A+   A AAR   V AG+L
Sbjct: 20  RLWAVVLALCAGTLGLSAHAQQTLSLDAALRFAEERSRQLVAQDAAAGAARAMAVAAGQL 79

Query: 67  PDPRLNLGVQNLPVDGSDRWSTNRDFMTMQVVGLSQEVPNRDKRKARVETAQATVERADA 126
           PDP L  G+ NLPV+GSDR+S  RDFMTM+ +G+ QE    DKR+AR        E A+A
Sbjct: 80  PDPVLKAGISNLPVNGSDRFSLTRDFMTMRSIGVMQEFTRSDKRQARAARFDREAEVAEA 139

Query: 127 EALFERLKVRAATAQAWITAYTLQRKLQQFDMLFNENRLLAAAVRARLAA---GGGASAD 183
                   +R  TA AW+  Y    + Q  D+L  +   L   +    AA   G G  AD
Sbjct: 140 GRTVALANLRRDTAIAWLDRYY---QGQMRDLLQTQRAELTLQIEGADAAYRGGRGTQAD 196

Query: 184 ALAPGQEAAQLEEQKDQLLTQATQ---ARAALKRWIGQDADAQAPAFPQWP---VRAPDY 237
                   AQL+   D++L Q  Q   A+  L RW+G      + A P+     + A + 
Sbjct: 197 VFTARSALAQLD---DRILAQERQIATAQTRLARWVGPGTPPPSMALPELGSVRLDARNL 253

Query: 238 LHTLHAHPELAAYGAMTREAQAQVQQAIAEKKSDWGWQVDYQRRGPEFSNMVSVQVSFQL 297
              +  HP++A        A+A+   A + K+SDW  ++ Y +RGP +SNMVS+ +S  L
Sbjct: 254 EAQIGEHPQIALMARQEAVARAEADVAQSNKRSDWSVELMYSQRGPAYSNMVSLNLSIPL 313

Query: 298 PLFSGSRQDPMIAARRAQVRQLEDEQEAALREHTAQLEADLAEYQRLQRAVTRSRDTLLP 357
            L   +RQD  +AA+ A V QL+ ++E A RE  A+  + L ++Q  ++ +     +L+P
Sbjct: 314 QLDQKNRQDRELAAKLATVEQLQAQREEATRESAAEALSWLQQWQSNRKRLALYDSSLIP 373

Query: 358 LAEQRVSLALADYRAGKSALEEVLTARRQRVEARLQDIDLQGQLAATAARLHFV 411
           LA +R    LA YR G   L   L  RR  V+ RL+ + L+ + AA  A+L F+
Sbjct: 374 LAAERTQAVLAAYRGGAGTLSAALETRRMEVDTRLERLRLEMETAALWAQLEFL 427