Pairwise Alignments

Query, 417 a.a., metal RND efflux outer membrane protein, CzcC family from Pseudomonas putida KT2440

Subject, 454 a.a., type I secretion outer membrane protein, TolC family from Alteromonas macleodii MIT1002

 Score =  116 bits (290), Expect = 2e-30
 Identities = 109/438 (24%), Positives = 193/438 (44%), Gaps = 49/438 (11%)

Query: 13  AAALVLLLPALSAQANSLTLDDALQLAERNAPSLQARQEQASAARHSVVPAGELPDPRLN 72
           A +  ++ PA++ +   LTL  A+++A  N P L +   +  A   S V A  LPDP +N
Sbjct: 13  AFSFSMVSPAIANE--KLTLKRAVEIAVENDPWLVSSAHRERATLSSSVVASSLPDPVVN 70

Query: 73  LGVQNLPVDGSDRWSTNRDFMTMQVVGLSQEVPNRD-----KRKARVETAQATVERADAE 127
           +G+ N+P DG   ++ +++ MT   VG+SQ  P  D      R+ R + A+  + RAD  
Sbjct: 71  IGLANVPTDG---FAFDQEPMTQLKVGVSQMFPRGDSLAIRSRQLREQAAEHPLMRADRV 127

Query: 128 ALFERLKVRAATAQAWITAYTLQRKLQQFD---MLFNENRLLAAAVRARLAAGGGASADA 184
           A     K R   +  W+  Y  Q+ ++  D    LF +   +A A     A G     D 
Sbjct: 128 A-----KARVQVSNLWLEIYRAQQSVKLIDEDKALFEQLSDIAKA-NYSTAFGRVNQQDI 181

Query: 185 LAPGQEAAQLEEQKDQLLTQATQARAALKRWIGQD----ADAQAPAFPQ--WPVRAPDYL 238
           +    E  +LE++  +L     +A   L  W+ +D    + +   AF +   P   P+  
Sbjct: 182 VRAKLELTRLEDRLTKLRALEERATGKLLEWLVRDQNYPSQSGFDAFSRLTLPHALPEIK 241

Query: 239 H-------------------TLHAHPELAAYGAMTREAQAQVQQAIAEKKSDWGWQVDYQ 279
           +                    L+ HP + +     R +Q  +  A  + K  WG    Y 
Sbjct: 242 NMGQNMRTILERRDQQSLAMVLNQHPLILSIEQRIRASQTGIDLAKEKYKPQWGVNASYA 301

Query: 280 RR-----GPEFSNMVSVQVSFQLPLFSGSRQDPMIAARRAQVRQLEDEQEAALREHTAQL 334
            R     G   ++ +S+ VSF +PLF+ +RQD  ++A  +    ++ ++   LRE  + +
Sbjct: 302 YRDDTPDGTSRADFLSMGVSFDVPLFTENRQDQEVSAAVSLSEAIKTDKRLVLREMMSYI 361

Query: 335 EADLAEYQRLQRAVTRSRDTLLPLAEQRVSLALADYRAGKSALEEVLTARRQRVEARLQD 394
           ++  AE +RL          LL   +++   +L  Y   +    EV+ AR   + AR+  
Sbjct: 362 QSLYAENERLMERQALYELELLEQMQEQAEASLNAYTNDEGDFAEVVRARIADLNARIDA 421

Query: 395 IDLQGQLAATAARLHFVY 412
           +D+   L  T  +L++ +
Sbjct: 422 LDISVDLVKTKIQLNYYF 439