Pairwise Alignments

Query, 469 a.a., copper sensor protein from Pseudomonas putida KT2440

Subject, 442 a.a., Copper sensory histidine kinase CusS from Variovorax sp. SCN45

 Score =  189 bits (480), Expect = 2e-52
 Identities = 125/439 (28%), Positives = 214/439 (48%), Gaps = 25/439 (5%)

Query: 22  AVLVVAGISFNMLSQH-----HFRMLDEQALSEKLESTRHILSIQAPGTGMEELRPQLRA 76
           A+  + G+SF  ++ +      F++   +     +E  +H++   +    +  LR +L  
Sbjct: 15  AIQTLIGLSFVCVAVYAATRWSFQLKQSEEFLRYIELVQHVVEETSNPPDLNALRHKLGD 74

Query: 77  LLGAHQDLTAEILTSEGEVLFSDLKAVQIPDKYKRADKEEMWEWQDESHNFRGITTDVEI 136
              +H D  A +   E +V  S   A +               W        G+  D   
Sbjct: 75  YFLSHPDAAAAVWVGEEQVYLSPGPAAK-------------GNWVTRDRMLEGLAID--- 118

Query: 137 QGQPAPGTVMLMLDITSHAHFFETLQRWFAIGLVISALVSAGIGWLVAKSGLRPVEQITK 196
            G+P    + L LD++        L     +   + +L+ A  G LV + GL+ ++ +  
Sbjct: 119 -GKPIK--LQLTLDVSKDDLLLRRLAWTLFLATTLGSLLVAFTGSLVVRRGLKQLKLLAA 175

Query: 197 VATSISARSLQERIPLEPVPLELQTLILSFNGMLARLEDAFVRLSNFSADIAHELRTPVS 256
                   +   RI       ELQ  +  FN +L R+E A+ +L +F+AD+AHELRTP++
Sbjct: 176 KTAEAGPENAGIRIDASKYASELQPWVGQFNALLERVEGAYEQLESFNADVAHELRTPLA 235

Query: 257 NLLTHTEVVLTRKRDVDAYEENLYSNLEDLKRMSRMIDDMLFLAKSDNGLIIPEQVDIQL 316
           N++   EV L++ R V A ++ L S LE+  R+S ++ DMLFL+K+D G        + +
Sbjct: 236 NMIAQAEVELSQARSVAALQDALSSQLEEAHRLSGIVTDMLFLSKADRGARARRTGPVSI 295

Query: 317 HDLVSKLFEYYQLLADDRGIRLTLQGKGVISGDRLMIDRAVSNILSNAVRYTPDGSGISV 376
            + V+ + E+++   +   + L + G   +  D  ++ RAVSN++SNA+RY    S I V
Sbjct: 296 AEQVAAVAEFHEAELEAAELSLKIDGDANLLVDVGLLRRAVSNLVSNAIRYATPQSLIRV 355

Query: 377 EIQQAADKVTLTIKNGGATIDPQHINKIFDRFYRADPARREGGPSNAGLGLAITRSIVKA 436
            I+Q A+ + L + N G  IDP  +  +F+RFYRAD + R G  S+ GLGL I  +I + 
Sbjct: 356 AIEQEANAIRLFVDNRGEPIDPSALPHLFERFYRADRS-RSGSSSHHGLGLTIVSAIARM 414

Query: 437 HDGKVWCTSSEGVTAFNFI 455
           H G  + +S+ GVT    +
Sbjct: 415 HGGSTFASSAGGVTRIGLV 433