Pairwise Alignments

Query, 302 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 311 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  212 bits (540), Expect = 8e-60
 Identities = 114/296 (38%), Positives = 176/296 (59%), Gaps = 6/296 (2%)

Query: 6   LPPLNSLHAFESAARHLSFTLAAKELNVTQGAISRQVRLLEDYLGKALFTRTTRSMSLTP 65
           LPPLN L  FE+AARHLSFT AA ELN+TQ A+SRQV+ LE+ L + LF R  + +SLTP
Sbjct: 8   LPPLNCLQTFEAAARHLSFTQAAHELNLTQSAVSRQVKRLEEDLARPLFYRLAQGLSLTP 67

Query: 66  TGAQYYETVRECMLHLARATGDIRQWQGNQQVTVATSTAMASLWLLPKVSEFQSAHENID 125
            G +Y+ TV+  +  L R + ++R+   ++Q+T+A++  ++S+WL   + +FQ  H ++D
Sbjct: 68  AGVRYFRTVQRLLRELDRESAELRRRGADRQLTLASTPTISSIWLAGLLPQFQRDHPDLD 127

Query: 126 LRIIAHDHVKDYARLDSDLALYYC---NPPPKDMAVTPLF-SEEIFLVCSPAYLARHPQL 181
           +RI+  +        + DL L+Y       P  + ++P+F SE++  VCSP YL RH  +
Sbjct: 128 IRILCSESPSHLDVSEYDLGLFYHLDELAAPHGLELSPVFDSEQVITVCSPGYLERHGPI 187

Query: 182 SSIEG-LSSCTWLWLEDSQRDWVGWPEWFKRLGYEPMTPKHRVNINSYGMLIQSAISGQG 240
             +   L + T L +ED   DW+ W +WF   G +  +P+H +  NSY +L+QSA+ G G
Sbjct: 188 RDLHHLLHAHTLLIVEDHHHDWLTWADWFADAGADYYSPRHALRTNSYQLLMQSAVMGHG 247

Query: 241 VALAWGNLVDDALSTGALVKPNDVVLQTDAKFCLLESSTERGPRESVRLFRDWLMA 296
           VAL W  L++  L +G L       + +  +  L++    R P  +VR FR WL A
Sbjct: 248 VALGWKRLLETDLESGRLQMALPHSMHSRGRLHLMQPH-HRNPPAAVRSFRQWLQA 302