Pairwise Alignments

Query, 302 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 301 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score =  130 bits (327), Expect = 4e-35
 Identities = 102/303 (33%), Positives = 137/303 (45%), Gaps = 19/303 (6%)

Query: 3   IQPLPPLNSLHAFESAARHLSFTLAAKELNVTQGAISRQVRLLEDYLGKALFTRTTRSMS 62
           ++ LPPL SL AFE+AARH S  LAA EL+VT  AIS QVR LED LG ALF R  R + 
Sbjct: 4   LRQLPPLASLRAFEAAARHCSAKLAAHELSVTPTAISHQVRQLEDSLGVALFIRQPRQLV 63

Query: 63  LTPTGAQYYETVRECMLHLARATGDIRQWQGNQQVTVATSTAMASLWLLPKVSEFQSAHE 122
           LTP G +    + E    +A A   +R     Q +T++   A+A+ WLLP V   ++ H 
Sbjct: 64  LTPQGRELQAVLGESFNAMANAVARLRAPPQRQAITLSAMPAVAARWLLPGVGALRALHP 123

Query: 123 NIDLRIIAHDHVKDYARLDSDLALYYCNPPPKDMAVTPLFSEEIFLVCSPAY-------L 175
            +DLRI A         + +D+A+ Y +     M    LF       CSPA        L
Sbjct: 124 KLDLRIHASHEAVALDGVTADVAIRYGHGRWPGMVAEKLFDNVFAPACSPALKLKKRGDL 183

Query: 176 ARHPQLSSIEGLSSCTWLWLEDSQRDWVGWPEWFKRLGYEPMTPKHRVNINSYGMLIQSA 235
           ARH  L             +  S+     W EW +      +        +     + +A
Sbjct: 184 ARHTLLH----------FTVPGSRNQPGTWMEWQQAAQVAGLDVSAGPVFSDETHTVSAA 233

Query: 236 ISGQGVALAWGNLVDDALSTGALVKPNDVVLQTDAKFCLLESSTERGPRESVRLFRDWLM 295
           + GQGVAL    L+ D L  G LVKP    L     F L+     R       +F +W+ 
Sbjct: 234 LQGQGVALMSLALIADELRAGNLVKPFGPEL-PGLPFYLVCPEARRSEPAVAAVF-EWVR 291

Query: 296 ALP 298
            LP
Sbjct: 292 GLP 294