Pairwise Alignments

Query, 302 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 294 a.a., putative Transcriptional regulator AmpR from Pseudomonas putida KT2440

 Score =  142 bits (358), Expect = 9e-39
 Identities = 97/297 (32%), Positives = 154/297 (51%), Gaps = 6/297 (2%)

Query: 1   MKIQPLPPLNSLHAFESAARHLSFTLAAKELNVTQGAISRQVRLLEDYLGKALFTRTTRS 60
           M  + LPPLN L AFE +AR+L+FT AA+EL++TQGA+S+Q+R LE  LG ALF R  R 
Sbjct: 1   MTQKTLPPLNWLRAFEVSARYLNFTHAAEELHLTQGAVSQQIRHLESQLGVALFKRLPRG 60

Query: 61  MSLTPTGAQYYETVRECMLHLARATGDIRQWQGNQQVTVATSTAMASLWLLPKVSEFQSA 120
           + LT  G  Y   V++ +  LA  T +I   +  + + V  S +    WL P++++F+ +
Sbjct: 61  LGLTEEGQSYLPVVQDAISRLAVGTNEIFGQRQRRPLKVRGSLSFLHFWLAPRLADFRRS 120

Query: 121 HENIDLRIIAHDHVKDYARLDSDLALYYCNPPPKDMAVTPLFSEEIFLVCSPAYLARHPQ 180
           H  +D+R I++  VK+    D DL + + +     +    L  + +  VC+PA LA  P 
Sbjct: 121 HPQVDIRYISNLWVKELDAED-DLEIRWGSGQWAGVEAQRLTRDMLVPVCAPALLAGCP- 178

Query: 181 LSSIEGLSSCTWLWLEDSQRDWVGWPEWFKRLGYEPMTPKHRVNINSYGMLIQSAISGQG 240
           L     L+    L +   +    GW  W +R+G + +     +  ++    ++ A  G G
Sbjct: 179 LREPRDLARVPLLHVLGYEE---GWGYWLERVGADQVDSSSGLQFDTLVSTLRMAELGLG 235

Query: 241 VALAWGNLVDDALSTGALVKPNDVVLQTDAKFCLLESSTERGPRESVRLFRDWLMAL 297
           VALA  +LV+D L  G LV P    ++    F L+    E       + F  WL+A+
Sbjct: 236 VALARSSLVEDLLQEGRLVAPFAQRIEASESFFLVRGLGE-ALSPDAQAFSHWLVAM 291