Pairwise Alignments

Query, 567 a.a., Choline/carnitine/betaine transporter family protein from Pseudomonas putida KT2440

Subject, 527 a.a., BCCT transporter from Pseudomonas simiae WCS417

 Score =  225 bits (573), Expect = 4e-63
 Identities = 149/550 (27%), Positives = 262/550 (47%), Gaps = 44/550 (8%)

Query: 11  LNPTVTIWSLLAVVAFVLFCALFAEHAAAVFQRASDFILQNFKWFYLISVTGVLGLLIYL 70
           L P V   + L ++A V+   +      AV ++ ++ IL+NF W +      ++ L   +
Sbjct: 5   LRPLVFWPTFLILLAAVIASYIDLNAFLAVSKQLNNLILKNFSWLFSAGSFAMVVLTAIV 64

Query: 71  MCSKFGSMKLGRDDDKPEFSFGSWIAMLFSGGMGIGLIFWSVAEPMWHYAGNPFATGL-- 128
             S  G +++G +D +P  S   W  +     + +G++FW+ AEP++H  G P +  +  
Sbjct: 65  YFSALGKVRIGGEDAQPLLSKWRWFMVALCTTLAVGVLFWTTAEPLYHLYGPPTSLPIEA 124

Query: 129 -TDEAATTAMRITLFHWGLHPWAIFTIVGLGLAYFAYRKGLPLSMRSILYPLIGERIYGP 187
            +  A T AM     HW + P+AI+ +  L  A   Y +    S+ ++L PL+GE     
Sbjct: 125 GSSAAKTFAMSTMFLHWTITPYAIYLVPSLVFALVFYNRRSNFSIGAMLEPLLGEARVKR 184

Query: 188 IGHVVDILAVVITAFGVSQSLGLGVVQMNTGLSQVFD---LPISLGVQITLIVLITLVTT 244
              ++D LA+     G++ SLG G + +  GL+Q       P+ L + I +IV IT V  
Sbjct: 185 YAGLIDTLAMFALVAGMASSLGTGALTLAGGLAQYIGGETTPLRLAIIIAIIV-ITFVA- 242

Query: 245 VSVMAGVSRGMKRLSEWNMLLSVVLVVLILLLGPTRYIINLMLESTGDYASHVVGLSFWS 304
            S  +G+ +G+  LS +N  + + L + +LL GPT Y+ +L +ES G Y       S ++
Sbjct: 243 -SAASGLQKGIVMLSSFNTWIMLALGLFVLLCGPTLYMFSLGVESLGVYLDTFFSRSLFT 301

Query: 305 DTQKDSGWQNWWTAFYWPWWMTWGPFVGLFIARISKGRSIRELIAGALLVPTLVTIIWMS 364
                  W + WT FYW  W  W P   LF+ +I +G ++RE I   +L P L T +W+ 
Sbjct: 302 GAASGDTWPHSWTVFYWSVWFAWAPVSALFLGKIGRGYTVREFIHINMLYPALFTAVWIC 361

Query: 365 VFGGTALKAEQLDRQQHAELVASGELQGDKAKYEGGTVLLATKQETTAAMFTLLHKIDAG 424
           +F GT+L  + L                     +G    +  +Q     ++ +  ++ A 
Sbjct: 362 IFSGTSLYFDALG--------------------DGSLNRVLNEQGVEHVLYQMFQQLPAS 401

Query: 425 TLGKVLSVLVCILLATYFITSADSGTQVLCTLNSMG-------SANPPQSIRLLWCILEG 477
             G +++ L+ +   + F+T+ADS T V+  L S G         NP  +++++W ++ G
Sbjct: 402 --GLMIAFLLFVAFIS-FVTAADSSTDVIANLCSKGVTADSDLDGNP--ALKIVWGVIIG 456

Query: 478 AIAMALLMAGGLKAIQMASIAAGLPIAGFILLISYTLMRSLRQEMADGLLDTPPGGRLPI 537
           +++  ++   G+  ++M S   GLP    +LL S +L+  L+      LLD     R P 
Sbjct: 457 SVSWVMVSFVGIDGVKMLSNLGGLPGMLLVLLASTSLIFWLKN---PALLDVKRHQRTPA 513

Query: 538 PGIHPQGITP 547
             +H     P
Sbjct: 514 TELHSASPAP 523