Pairwise Alignments

Query, 567 a.a., Choline/carnitine/betaine transporter family protein from Pseudomonas putida KT2440

Subject, 504 a.a., Glycine betaine transporter OpuD from Variovorax sp. SCN45

 Score =  394 bits (1012), Expect = e-114
 Identities = 208/500 (41%), Positives = 302/500 (60%), Gaps = 26/500 (5%)

Query: 23  VVAFVLFCALFAEHAAAVFQRASDFILQNFKWFYLISVTGVLGLLIYLMCSKFGSMKLGR 82
           + A VL+  L      +VF  A   I +NF WFYL  V G++ L  +L  S+FG +KLG 
Sbjct: 10  IAAVVLWGLLSPASLDSVFSTALSGITRNFGWFYLWVVLGLVVLAFFLAFSRFGDLKLGE 69

Query: 83  DDDKPEFSFGSWIAMLFSGGMGIGLIFWSVAEPMWHYAGNP-FATGLTDEAATTAMRITL 141
           +DD+PEFS G+W AMLF+ GMGIGL+FW VAEP+ HYA  P      T +AA  AMR   
Sbjct: 70  EDDEPEFSLGAWFAMLFAAGMGIGLVFWGVAEPISHYANPPPGVVAGTPDAAGVAMRYAF 129

Query: 142 FHWGLHPWAIFTIVGLGLAYFAYRKGLPLSMRSILYPLIGERIYGPIGHVVDILAVVITA 201
           FHWGLHPWAI+ IVGL +A+F +R+   L++ S     +  R    +    ++LAVV TA
Sbjct: 130 FHWGLHPWAIYGIVGLSIAFFTFRRKT-LALVSSATEALPWRFVRRLSPAFNVLAVVATA 188

Query: 202 FGVSQSLGLGVVQMNTGLSQVFDLPISLGVQITLIVLITLVTTVSVMAGVSRGMKRLSEW 261
           FGV+ SLG+G  Q+N+GL   F   I  G Q  +IV+ T++   S ++GV RG+K LS  
Sbjct: 189 FGVAASLGMGATQINSGLHAAFGTAIGRGTQAAIIVVTTVLFVTSAVSGVERGVKWLSMG 248

Query: 262 NMLLSVVLVVLILLLGPTRYIINLMLESTGDYASHVVGLSFWSDTQKDSGWQNWWTAFYW 321
           N++L+ +L +++L+LGPT  I+     + G Y +  V +S   +  ++S W   WT FYW
Sbjct: 249 NLVLAALLALVVLVLGPTVAIVETFTNTLGAYIAEFVRMSLRMNPFRNSSWVGDWTLFYW 308

Query: 322 PWWMTWGPFVGLFIARISKGRSIRELIAGALLVPTLVTIIWMSVFGGTALKAEQLDRQQH 381
            WW+ W PFVGLFIAR+S+GR+IR+ I G ++ PTLV   W SVFGG AL  +       
Sbjct: 309 AWWLAWSPFVGLFIARVSRGRTIRQFILGTVIAPTLVGFAWFSVFGGAALNFQ------- 361

Query: 382 AELVASGELQGDKAKYEGGTVLLATKQETTAAMFTLLHKIDAGTLGKVLSVLVCILLATY 441
                          ++G  ++ A K + +  MF +     A  +G +LS++  +L+  +
Sbjct: 362 --------------IFQGVPLVEAVKADVSTTMFVM---FKAMPMGALLSMVATLLVFVF 404

Query: 442 FITSADSGTQVLCTLNSMGSANPPQSIRLLWCILEGAIAMALLMAGGLKAIQMASIAAGL 501
           F+TS DS T VL T+++ G+ NPP  +++ W +L  AIA++LL AGGLKAIQ A+I   L
Sbjct: 405 FVTSGDSATLVLGTMSTGGNPNPPARVKITWGVLVAAIALSLLFAGGLKAIQTATIVFAL 464

Query: 502 PIAGFILLISYTLMRSLRQE 521
           P A  ILL++ ++  ++R +
Sbjct: 465 PFAFVILLMALSVTLAIRDD 484