Pairwise Alignments

Query, 567 a.a., Choline/carnitine/betaine transporter family protein from Pseudomonas putida KT2440

Subject, 667 a.a., Choline transporter from Pseudomonas putida KT2440

 Score =  348 bits (894), Expect = e-100
 Identities = 184/521 (35%), Positives = 303/521 (58%), Gaps = 32/521 (6%)

Query: 11  LNPTVTIWSLLAVVAFVLFCALFAEHAAAVFQRASDFILQNFKWFYLISVTGVLGLLIYL 70
           +N  V   S L ++          E A  V   A  ++ + F W+Y++ + G L  ++YL
Sbjct: 16  VNRVVFFTSALMILVLTALLIAVPETAGQVLGVAQKWLTRTFGWYYMLVICGYLLFVVYL 75

Query: 71  MCSKFGSMKLGRDDDKPEFSFGSWIAMLFSGGMGIGLIFWSVAEPMWHYAGNPFATGLTD 130
             S +GS+KLG  DD+P+FS+G+W  MLFS G+GI L+++  +EP+ HY   P  T  + 
Sbjct: 76  AFSDYGSLKLGGKDDQPDFSYGAWAGMLFSSGIGISLLYFGASEPLDHYFNPPEGTPASL 135

Query: 131 EAATTAMRITLFHWGLHPWAIFTIVGLGLAYFAYRKGLPLSMRSILYPLIGER-IYGPIG 189
           EAA   +++T  HWGLH WAI+ +VGL + YFAYR   PL++RS LYPL+GER + G  G
Sbjct: 136 EAARQGLQLTFLHWGLHGWAIYALVGLAVGYFAYRHNQPLALRSALYPLVGERWVKGAAG 195

Query: 190 HVVDILAVVITAFGVSQSLGLGVVQMNTGLSQVFDLPISLGVQITLIVLITLVTTVSVMA 249
           + VDI  + +T  G+  +LG+G +Q+++GL  +F +  S    + +I+++  V TV+ ++
Sbjct: 196 NAVDIFGMFVTLLGLVTNLGIGAMQVSSGLEYLFGMDHSKTNLLVVILVMAGVATVAAVS 255

Query: 250 GVSRGMKRLSEWNMLLSVVLVVLILLLGPTRYIINLMLESTGDYASHVVGLSF-----WS 304
           GV  G++RLS  N++L   L++ +LL G T +++N  +++ GDY + +V  +F       
Sbjct: 256 GVENGIRRLSNLNIMLFSGLLIFVLLGGETLHLLNGFVQNVGDYLNGIVLKTFDLYVYEG 315

Query: 305 DTQKDSGWQNWWTAFYWPWWMTWGPFVGLFIARISKGRSIRELIAGALLVPTLVTIIWMS 364
           +  K   W   WT FYW WW++WGPFVG+FIARISKGR++R+L+ G LL+P   T+ W+S
Sbjct: 316 EAGKSERWLGLWTVFYWAWWISWGPFVGMFIARISKGRTVRQLVMGVLLIPLGFTLAWLS 375

Query: 365 VFGGTALKAEQLDRQQHAELVASGELQGDKAKYEGGTVLLATKQETTAAMFTLLHKIDAG 424
           +FG TAL  + +  Q   EL              G T L    ++ + +++ LL    A 
Sbjct: 376 IFGNTAL--DLVINQGAVEL--------------GKTAL----EQPSMSIYQLLEHFPAA 415

Query: 425 TLGKVLSVLVCILLATYFITSADSGTQVLCTLNSMG---SANPPQSIRLLWCILEGAIAM 481
            +   ++V V  +L   F+T ADSG  ++  L+  G     + P  + + W ++   + +
Sbjct: 416 KIVIGVAVFVGFVL---FLTPADSGAVMMANLSCTGGKVDEDAPHWMVVFWSVVITLVTI 472

Query: 482 ALLMAGGLKAIQMASIAAGLPIAGFILLISYTLMRSLRQEM 522
            LL AG  +A+Q   + AGLP +  ++L  + L ++++Q++
Sbjct: 473 GLLFAGNFEAMQTMVVLAGLPFSVVLVLFMFGLYKAMKQDV 513