Pairwise Alignments

Query, 567 a.a., Choline/carnitine/betaine transporter family protein from Pseudomonas putida KT2440

Subject, 657 a.a., choline/carnitine/betaine transporter BetTC from Pseudomonas putida KT2440

 Score =  434 bits (1115), Expect = e-126
 Identities = 218/508 (42%), Positives = 320/508 (62%), Gaps = 23/508 (4%)

Query: 11  LNPTVTIWSLLAVVAFVLFCALFAEHAAAVFQRASDFILQNFKWFYLISVTGVLGLLIYL 70
           LNP V   S + V   VL+   F EHA  +F++   +I+ N  WFY++ V  VL  +++L
Sbjct: 11  LNPPVFYTSAILVFLLVLYATAFQEHAQTLFEQVQRWIITNASWFYILVVALVLISVVFL 70

Query: 71  MCSKFGSMKLGRDDDKPEFSFGSWIAMLFSGGMGIGLIFWSVAEPMWHYAGNPFATGLTD 130
             S++G +KLG D  +P++   SW AMLFS GMGIGL+F+ VAEP+ H++  P     T 
Sbjct: 71  AVSRYGDIKLGPDHSEPDYRKSSWFAMLFSAGMGIGLMFFGVAEPVMHFSTPPVGDPGTV 130

Query: 131 EAATTAMRITLFHWGLHPWAIFTIVGLGLAYFAYRKGLPLSMRSILYPLIGERIYGPIGH 190
            AA  AM+IT FHWGLH WAI+ IV L LAYF++R GLPL++RS LYPLIGERIYGPIGH
Sbjct: 131 AAAREAMKITFFHWGLHAWAIYAIVALILAYFSFRNGLPLTLRSALYPLIGERIYGPIGH 190

Query: 191 VVDILAVVITAFGVSQSLGLGVVQMNTGLSQVFDLPISLGVQITLIVLITLVTTVSVMAG 250
            VD+ A++ T FGV+ SLG GV+Q+N+G   VF LP++  VQ+ LI     + T+SV +G
Sbjct: 191 AVDVFAILGTVFGVATSLGYGVLQINSGFHHVFGLPVNTTVQVILITATCALATLSVASG 250

Query: 251 VSRGMKRLSEWNMLLSVVLVVLILLLGPTRYIINLMLESTGDYASHVVGLSFWSDTQKDS 310
           + +G++ LSE N+ L+V+L++ +LLLGPT +++   +++TG Y S +V  +F     + +
Sbjct: 251 LDKGIRILSELNLSLAVILMLFVLLLGPTVFLLQTYVQNTGAYLSDIVNKTFNLYAYEPT 310

Query: 311 GWQNWWTAFYWPWWMTWGPFVGLFIARISKGRSIRELIAGALLVPTLVTIIWMSVFGGTA 370
            W   WT  YW WW++W PFVGLFIARIS+GR+IRE + G L VP   T++WM+VFG +A
Sbjct: 311 DWIGGWTLLYWGWWLSWSPFVGLFIARISRGRTIREFVCGVLFVPAGFTLLWMTVFGDSA 370

Query: 371 LKAEQLDRQQHAELVASGELQGDKAKYEGGTVLLATKQETTAAMFTLLHKIDAGTLGKVL 430
           +     D  +    V S                    ++++ A+F  L          ++
Sbjct: 371 IHMILNDGVKDLAAVVS--------------------EDSSLALFAFLEHF---PFSSII 407

Query: 431 SVLVCILLATYFITSADSGTQVLCTLNSMGSANPPQSIRLLWCILEGAIAMALLMAGGLK 490
           S++  +++  +F+TSADSG  V+  L S G  + P   R+ W +  GA+A+ALL+A GLK
Sbjct: 408 SLVAVLMVVVFFVTSADSGALVVDMLASSGQGHSPLWQRIFWSVCIGAVAIALLLANGLK 467

Query: 491 AIQMASIAAGLPIAGFILLISYTLMRSL 518
           A+Q A+IA+ LP A  +L+  + L ++L
Sbjct: 468 ALQTATIASALPFAVILLVAIWGLFKAL 495