Pairwise Alignments

Query, 567 a.a., Choline/carnitine/betaine transporter family protein from Pseudomonas putida KT2440

Subject, 516 a.a., putative Transporter, BCCT family from Pseudomonas putida KT2440

 Score =  223 bits (568), Expect = 1e-62
 Identities = 149/505 (29%), Positives = 263/505 (52%), Gaps = 42/505 (8%)

Query: 25  AFVLFCALFAEHAAAVFQRASDFILQNFKWFYLISVTGVLGLLIYLMCSKFGSMKLGRDD 84
           AF+L   +  +  +A+      +  + F  ++ + +     + +++  S+ G ++LG   
Sbjct: 36  AFLLAALIDIDTVSALVNTLFAWSTKAFGLYWQVLMLATFAVSLFIGFSRCGRVRLGGVT 95

Query: 85  DKPEFSFGSWIAMLFSGGMGIGLIFWSVAEPMWHYAGNP-FATGL---TDEAATTAMRIT 140
            +P+ S  +WIA++    +  G  FW+ AEP+ H+A  P F  GL   ++ AAT A+  +
Sbjct: 96  QRPDISTFNWIAVIMCALLAGGGAFWAAAEPLMHFASPPPFFAGLQPHSEAAATAALAQS 155

Query: 141 LFHWGLHPWAIF-TIVGLGLAYFAYRKGLPLSMRSILYPLIGER-IYGPIGHVVDILAVV 198
             HWG   WA+  +++ + L +  Y KGLPL+ R++LYPL G+R + GPIG + D  +++
Sbjct: 156 FVHWGFLAWAVLGSLLAIVLMHLHYDKGLPLAPRTLLYPLFGKRALKGPIGTLADAASII 215

Query: 199 ITAFGVSQSLGLGVVQMNTGLSQVFDLPISLGVQITLIVLITLVTTVSVMAGVSRGMKRL 258
               G    +G   +Q+++ +  V++LP ++  Q   IVL+T + TVS + G+ +G++ +
Sbjct: 216 AVVAGTIGPIGFLGLQISSAMHAVWELPNTIVTQSLTIVLVTAMYTVSCLVGL-KGIRFV 274

Query: 259 SEWNMLLSVVLVVLILLLGPTRYIINLMLESTGDYASHVVGLSFWSDTQKDSGWQNWWTA 318
           SE N+ L + L + +++ GPT +I+     +   +  H + L+ +   + D  W +WWT 
Sbjct: 275 SEINVWLMIGLALFMVVFGPTLFILGGFPAAFALHVEHFIPLTMF---RADPKWLDWWTV 331

Query: 319 FYWPWWMTWGPFVGLFIARISKGRSIRELIAGALLVPTLVTIIWMSVFGGTALKAEQLDR 378
           FYW W++ + P V L++ARIS+GR+IRE+I    ++  LVT+ W +V GGT +       
Sbjct: 332 FYWGWFIGYAPMVALYVARISRGRTIREIIMTLSIIAPLVTMFWFTVVGGTGI------- 384

Query: 379 QQHAELVASGELQGDKAKYEGGTVLLATKQETTAAMFTLLHKIDAGTLGKVLSVLVCILL 438
               EL   G +    AK E   +LL   Q                 LG ++S L   L 
Sbjct: 385 --GLELQTPGSVTAHGAKPE--DLLLGVTQNL--------------PLGGLVSALFLFL- 425

Query: 439 ATYFITSADSGTQVLCTLN-SMGSANPPQS-IRLLWCILEGAIAMALLM--AGGLKAIQM 494
              FI+ A +G  +  T+  +M S + P+  +R  W I  G  A+ L+   AGG+ A+Q 
Sbjct: 426 --SFISVATNGDAMAFTVALAMSSDDKPKKWLRGFWAIGMGLAAVVLITIGAGGVTALQS 483

Query: 495 ASIAAGLPIAGFILLISYTLMRSLR 519
             +   +P++  IL   +  +R  R
Sbjct: 484 FIVITAVPVSLVILPALWDAVRIAR 508