Pairwise Alignments

Query, 567 a.a., Choline/carnitine/betaine transporter family protein from Pseudomonas putida KT2440

Subject, 667 a.a., choline/carnitine/betaine transporter from Pseudomonas putida KT2440

 Score =  342 bits (877), Expect = 3e-98
 Identities = 185/517 (35%), Positives = 282/517 (54%), Gaps = 31/517 (5%)

Query: 11  LNPTVTIWSLLAVVAFVLFCALFAEHAAAVFQRASDFILQNFKWFYLISVTGVLGLLIYL 70
           +NP V  ++   ++ F L      + A      A ++      W+Y++++T  L  ++  
Sbjct: 15  MNPPVFYFAASFILIFGLVVISNPQAAGDWLLAAQNWAANTVGWYYMLAMTLYLVFVVVT 74

Query: 71  MCSKFGSMKLGRDDDKPEFSFGSWIAMLFSGGMGIGLIFWSVAEPMWHYAGNPFATGLTD 130
             S +G +KLG D D+PEFS+ SW  MLF+ G+ I L F+ V+EP+ H    P     T 
Sbjct: 75  ALSGYGKIKLGADHDEPEFSYLSWAGMLFAAGISITLFFFCVSEPLTHMLQPPQGEAGTV 134

Query: 131 EAATTAMRITLFHWGLHPWAIFTIVGLGLAYFAYRKGLPLSMRSILYPLIGERIYGPIGH 190
           EA   AM+I   HWGLH W +F  VG+ LAYFAYR  LPL++RS LYPLIG+RI GPIG+
Sbjct: 135 EAGRQAMQILFLHWGLHGWGVFAFVGMALAYFAYRHNLPLALRSALYPLIGKRINGPIGY 194

Query: 191 VVDILAVVITAFGVSQSLGLGVVQMNTGLSQVFDLPISLGVQITLIVLITLVTTVSVMAG 250
            VD   ++ T FG+   +G GV+ +N GL  +F +  S  VQ+ LI L+        +AG
Sbjct: 195 AVDGFGIIATVFGLGADMGFGVLHLNAGLDYLFGISHSQWVQVILITLMMGAAVAVAVAG 254

Query: 251 VSRGMKRLSEWNMLLSVVLVVLILLLGPTRYIINLMLESTGDYASHVVGLSFWSDTQ--- 307
           V +G++ +S+ N+ L+  L++ +L  GPT+++ N ++++ GDY   +   SF  D     
Sbjct: 255 VEKGVRVMSDINLFLACALLLFVLFAGPTQHLFNTLIQNLGDYLGALPRKSF--DVYAYG 312

Query: 308 KDSGWQNWWTAFYWPWWMTWGPFVGLFIARISKGRSIRELIAGALLVPTLVTIIWMSVFG 367
           ++ GW   WT FYW WW+ W PFVGLFIARIS+GR+IRE + G LL+P   T+ WMS+FG
Sbjct: 313 ENRGWLGGWTVFYWAWWIAWAPFVGLFIARISRGRTIREFVFGVLLIPLGFTLAWMSIFG 372

Query: 368 GTALKAEQLDRQQHAELVASGELQGDKAKYEGGTVLLATKQETTAAMFTLLHKIDAGTLG 427
            +AL                     D+    G T L  +  +  +    LL  ++     
Sbjct: 373 NSAL---------------------DQVINHGMTALGQSALDNPSMSLYLL--LETYPWS 409

Query: 428 KVLSVLVCILLATYFITSADSGTQVLCTLNSMG---SANPPQSIRLLWCILEGAIAMALL 484
           K +      +   +F+TSADSGT VL TL++ G     + P  +R+ W  +   I  ALL
Sbjct: 410 KAVIATTVFISFVFFVTSADSGTVVLSTLSAKGGDADEDGPNWLRIFWGAMTALITSALL 469

Query: 485 MAGGLKAIQMASIAAGLPIAGFILLISYTLMRSLRQE 521
            AG + +++ A +   LP +  +L + + L ++   E
Sbjct: 470 FAGSIDSLKSAVVLTSLPFSLILLCMMWGLHKAFYLE 506