Pairwise Alignments

Query, 728 a.a., DNA-dependent ATPase I and helicase II, nucleotide Excision Repair Complex from Pseudomonas putida KT2440

Subject, 761 a.a., DNA helicase II from Magnetospirillum magneticum AMB-1

 Score =  494 bits (1271), Expect = e-144
 Identities = 295/719 (41%), Positives = 410/719 (57%), Gaps = 39/719 (5%)

Query: 10  LNSLNDAQRQAVAATLGRQLVLAGAGSGKTRVLVHRIAWLIQVEQASPHSILSVTFTNKA 69
           L  LN  Q QAV  T G  LVL+GAG+GKT+VL  R+A ++    A P   L+VTFTN+A
Sbjct: 33  LQGLNPEQFQAVTTTDGPVLVLSGAGTGKTKVLTSRLAHILASNLAQPWQCLAVTFTNRA 92

Query: 70  AAEMRQRIEQLLGINPAGMWVGTFHGLAHRLLRAHWQEARLVQNFQILDSDDQQRLIKRV 129
           A EM++R+ QL+G    G+W+GTFH L  R+LR+H +   L  +F +LDSDDQ R++K+V
Sbjct: 93  AREMKERVGQLVGPVSDGIWLGTFHSLCLRILRSHAEAVGLGGDFTVLDSDDQMRVLKQV 152

Query: 130 MRELGLDEQKWPARQAQWFINGQKDEGLRPQHIQAGGDLFLATMREVYTAYEQACERAGV 189
           M E  +D +  P +     I   KD  + P    A G       + +Y AY+        
Sbjct: 153 MAEAHVDPKGTPPQGLMATIQRWKDRAVTPDKAAADGGAE-GQAKTLYRAYQDRLRSLNA 211

Query: 190 IDFSELLLRALDLWRDHPGLLEHYQRRFRHVLVDEFQDTNAVQYAWLRLLARGGDSLMAV 249
            DF +LLL  L ++      L  +Q RFR++LVDE+QDTN  QY WLRLLA+   ++  V
Sbjct: 212 CDFGDLLLHVLTVFLSDAEALARWQGRFRYLLVDEYQDTNVAQYLWLRLLAQTHRNICCV 271

Query: 250 GDDDQSIYGWRGAKIENIHQYTADFPDAEMIRLEQNYRSTGGILKAANALIANNSGRLGK 309
           GDDDQSIY WRGA++ NI ++  DFP A+++RLE NYRST  IL AA+ LIANN GRLGK
Sbjct: 272 GDDDQSIYSWRGAEVGNILRFEKDFPGAKVVRLESNYRSTPHILAAASTLIANNEGRLGK 331

Query: 310 ELWTDMGEG----EPLTLYAAYNEHDEARYVVETIESLVKQGNARNEIAILYRSNAQSRV 365
            L   +       E +   A ++   EAR V E IE+L ++G   + +AIL R+  Q+R 
Sbjct: 332 TLRPGIIHEPEAIEKIRTKAVWDGEAEARMVAEEIETLQRRGEKLSSMAILVRAGFQTRE 391

Query: 366 LEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLIEGRGNDAALERVINVPPRGIGEKT 425
            EE L+   IPYR+ GG RF+ER EI++AMAYLRL+    +  A ERV+N P RG+GE  
Sbjct: 392 FEERLITTGIPYRVIGGPRFYERLEIRDAMAYLRLVVSAADGLAFERVVNTPKRGLGEAA 451

Query: 426 VEAIREHARHSQLSMWEAMCQLIAAKALKGRAASALGAFIELIEGLAAKVVDMPLHTMTQ 485
           V+ I   AR  Q+ + EA  +L+    LK +A  AL  FIE ++   + +  MP   +  
Sbjct: 452 VQTIHMVARAEQVPLLEAARRLVDTDELKPKARQALARFIEDVDRWRSLLESMPHPELAA 511

Query: 486 TTIEQSGLITYHQEEKGEKGQARVENLEELVSAARNFESTDEDADLSPLSAFLGHASL-E 544
           T +++SG +   + +K      RVENL+ELV+A   ++S         L++FL H +L  
Sbjct: 512 TILDESGYVDMWKADKSADAPGRVENLKELVAALEEYDS---------LASFLEHVALVM 562

Query: 545 AGDTQADEHEDSIQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGR--LEEERRLA 602
             D++AD   DS+ +MTLH AKGLEF  VFL G EE +FPH  +L E G   LEEERRLA
Sbjct: 563 ENDSRAD--LDSVVIMTLHGAKGLEFDSVFLPGWEEEVFPHSRALAESGTKGLEEERRLA 620

Query: 603 YVGITRAMRQLVMTYAETRRLYGSETYNKVSRFVREIPAGLVQEVRLSNSVSRPFGGAKT 662
           YVG+TRA +++++++A  RR+Y        SRFV E+P   V+              +K 
Sbjct: 621 YVGLTRARKRVLVSFAANRRIYNQWKSQLPSRFVEELPESHVERSGERGLHGGGLAESKA 680

Query: 663 ATNSNLFANASIPQT--------------------AFNLGQRVQHAVFGEGVILNFEGS 701
           A N   ++ A   Q                      F  G RV H  FG G +L+ +G+
Sbjct: 681 AWNDPAWSRARFGQPRRETAAAPSWGQAKPRESAGGFKPGARVFHDKFGNGTVLSLDGN 739