Pairwise Alignments

Query, 288 a.a., Transcriptional regulator, RpiR family from Pseudomonas putida KT2440

Subject, 286 a.a., RpiR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  113 bits (283), Expect = 4e-30
 Identities = 80/288 (27%), Positives = 138/288 (47%), Gaps = 3/288 (1%)

Query: 1   MNLLQHIAQSRHLLRKSELKVADHVLLDPAAVMHSSMADLAHSVGISEPTIVRFCRAIGC 60
           M++L  I   +      E ++A  +L D      +S+ +L+    +S  T+ RF R++GC
Sbjct: 1   MDILYQIRARQDAFSAGEGRIAKLMLNDVGFAASASLEELSQRAEVSTATLSRFARSVGC 60

Query: 61  SGFQDLKLKLAQSLAAGASFGQFAIHEDDSVADYSLKIFDTTLHTLMEVREHLDPQALQQ 120
              +DL+L+LAQ+   G+ F   A   + S   +  +I      TL +     +  +   
Sbjct: 61  RDLRDLRLQLAQASGVGSRFLDPAGLPEQSA--FHRQILGDIEATLRQHLSGFNQASFVD 118

Query: 121 AVSAMAQAQRVEFYGFGASGAVAADA-QHKFFRLLLSAAAYSDPHMQAMSAVTLKPGDVA 179
           AVS + +A+ +  +G G   ++ +D  Q +  RL    AA  DP M  ++A TL P    
Sbjct: 119 AVSLLGKARMIHAFGMGGPSSLCSDELQVRLVRLGYPIAACHDPVMMRVTAATLGPEHAL 178

Query: 180 VCISQSGRSKDLLITANLVRESGANLITLCPSQTPLAELSTVNLAIDVHEDTEIYTPLTS 239
           +  S +G + +LL    L R   A ++ +  + +PLA+L+ V L +   E + IY P  +
Sbjct: 179 IVCSLTGLTPELLDVVTLARNYDARIVAITLADSPLAQLADVLLPLQPAETSFIYKPTAA 238

Query: 240 RIAHLVVIDVLAMGVAMARGPSLVNHLKSVKRSLRSLRLSPKSIKATD 287
           R   L+ ID+LA  +A+A        L+ +K +L   R  P S+   D
Sbjct: 239 RYGLLLAIDLLATELALALPDDNQERLRRIKLALDDYRGGPDSLPLGD 286