Pairwise Alignments

Query, 288 a.a., Transcriptional regulator, RpiR family from Pseudomonas putida KT2440

Subject, 299 a.a., Transcriptional regulator of RpiR family in catabolic operon from Variovorax sp. SCN45

 Score =  144 bits (364), Expect = 2e-39
 Identities = 94/270 (34%), Positives = 141/270 (52%), Gaps = 1/270 (0%)

Query: 2   NLLQHIAQSRHLLRKSELKVADHVLLDPAAVMHSSMADLAHSVGISEPTIVRFCRAIGCS 61
           +LLQ IAQ R     +   + D +L DP  V+  S   LA     S PTI+R CR +G +
Sbjct: 4   SLLQKIAQIRSDAPATRRAILDLILEDPDRVLEESFEQLAERSRSSVPTIMRTCRDLGFA 63

Query: 62  GFQDLKLKLAQSLAAGASFGQFAIHEDDSVADYSLKIFDTTLHTLMEVREHLDPQALQQA 121
           G ++ KL LAQ LA G S     ++ +D+  +   KI  +   ++  VR  LD Q L  A
Sbjct: 64  GLREFKLALAQELALGGSPLHRRVNIEDAADEVVGKIARSAAASVSGVRGQLDMQVLDGA 123

Query: 122 VSAMAQAQRVEFYGFGA-SGAVAADAQHKFFRLLLSAAAYSDPHMQAMSAVTLKPGDVAV 180
           V+A+A A  V+ YG GA S  +A D Q + FRL LSA A++D H+Q ++    +PG V +
Sbjct: 124 VAAIAAAPHVDLYGAGATSWFMANDLQARLFRLGLSANAWADYHLQQVAGAAQRPGGVVI 183

Query: 181 CISQSGRSKDLLITANLVRESGANLITLCPSQTPLAELSTVNLAIDVHEDTEIYTPLTSR 240
            IS  G    LL   ++ R  GA ++ L    T LA  +   L + V +D  ++  + + 
Sbjct: 184 AISHVGGMPSLLDAVDIARGQGAKVVALTRPGTALAAKADFLLGLSVPDDAVMHVGIDAY 243

Query: 241 IAHLVVIDVLAMGVAMARGPSLVNHLKSVK 270
           + HL  I++L + VA  RG   V  L+  +
Sbjct: 244 LTHLTAIEILTVLVAQRRGEPAVQRLQRAR 273