Pairwise Alignments

Query, 320 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 328 a.a., HTH-type transcriptional activator CmpR from Azospirillum sp. SherDot2

 Score =  115 bits (289), Expect = 1e-30
 Identities = 95/317 (29%), Positives = 143/317 (45%), Gaps = 15/317 (4%)

Query: 8   MTLRQLQIFNEVCDLRSYSRAAEEMALTQPAVSLQIRQLEELIGQPLFEYVGKKLYLTEA 67
           M   QL+ F+ V     +++AA  + +TQP  S +++ LEE  G  LF+   +++ LTE 
Sbjct: 4   MNFAQLRAFHAVATEGGFTKAARLLNVTQPTCSQEVKALEETYGVTLFDRGNRQVTLTEV 63

Query: 68  AEALQRASHDIFGRLESLDMQLSDMQGSLQGQLKLAIESSAKYFVPHLFAAFKQRHPEVN 127
             AL   +  +F   E   M+L      L G   LA+ +   +    L A F + HP   
Sbjct: 64  GTALFAVTRRLFAA-EQEAMELLAGVRHLDGGT-LAVGADGPFHAVPLIARFTRAHPGPT 121

Query: 128 LTLTVVNRAQAIRRLSDNRDDLIIMSMVPQDMGLEFLPFLNNPIVAVAPPQHPLCKLEQL 187
           +TL V N    +  L + R D+ +++ VP D  L  LP   +P+ A+ P  HPL +   L
Sbjct: 122 VTLAVGNSRTMLEGLMETRIDVAVLADVPGDSRLYVLPLRRDPVRALLPKTHPLARRRAL 181

Query: 188 RMQDLEPHTLLVREQGSGTRKACEEYFKDKRVHFAQTLEVASADAQRECVIAGLGIALLT 247
            + DL    L++RE GS TR+  E       V  A  +E+ S +A  E V AGLGI   +
Sbjct: 182 ALGDLVAERLVLREPGSMTRRLVERALAAAEVTPAAVIEIQSREAVVEAVAAGLGIGFTS 241

Query: 248 RHAVNLELATGMLKELPVE------ELPLYRSWCVVQAKAKRQSPVALAFLAFIRGERAL 301
                     G L  LP+       E+  Y    VV  + +R+  V  AFL   R   A 
Sbjct: 242 AAEFT---GDGRLVLLPIAGAGAEIEMDEY----VVCLRERRRLAVVRAFLDLAREVAAE 294

Query: 302 ISALVERFSGKLPPTTA 318
             + +   S    P +A
Sbjct: 295 AGSPLSGLSAAAMPGSA 311