Pairwise Alignments

Query, 509 a.a., Transcriptional regulator, GntR family from Pseudomonas putida KT2440

Subject, 512 a.a., GntR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  715 bits (1846), Expect = 0.0
 Identities = 363/503 (72%), Positives = 411/503 (81%), Gaps = 3/503 (0%)

Query: 8   LPFDPAGIALDRSRGLSQQLYQALRARVLDGRLSSGTRLPATRDLAAMLALSRNSVVRAY 67
           L F PAGI LDR +GL++QLY ALR RVLDGRL SGTRLPATRDLAA L++SRNSVVRAY
Sbjct: 8   LSFTPAGIELDRRQGLTRQLYDALRQRVLDGRLVSGTRLPATRDLAAALSISRNSVVRAY 67

Query: 68  DQLYAEGFIESRVGDGTYVSRLP---KLSTQVSTGLSLGLSTGLSTFRQENTEDLSSGRH 124
           DQLYAEGF ESRVGDGTYV++LP   KLST +STGLS GLS GLST   +N +       
Sbjct: 68  DQLYAEGFTESRVGDGTYVAKLPTAKKLSTNLSTGLSTGLSPGLSTNPSQNPQAAPVKVI 127

Query: 125 ISAPLQRLKNNHLPPPRSGLPRAFRVGIPAFDLFPFDVWAKLQAGFWRNPSPAQLGYGDP 184
            SA L RL+NNHLP P +G PRAFRVG+PAFDLFPFDVWAKL A FWR P   QL YG+P
Sbjct: 128 HSAALGRLENNHLPLPPTGPPRAFRVGVPAFDLFPFDVWAKLNAAFWRKPDLEQLCYGNP 187

Query: 185 AGEPALRDLIAAYLRRSRGLSCTAEQIVITSGAQQAISLCAQLLLQPGDGVAVENPGYRA 244
           AG+P LR LIAAYLR SRG+ C+AEQIVITSGAQQAISLCAQLL+ PGDGVA+ENPGYRA
Sbjct: 188 AGDPRLRGLIAAYLRSSRGMQCSAEQIVITSGAQQAISLCAQLLVAPGDGVAIENPGYRA 247

Query: 245 AAHAFTLAGGRVCGVPVDEDGLDCGRLEQLTDCRLTYVTPAHQYPTGVTMSLARRLALLA 304
           A HAF LAG ++ GV VD +G+DC  L  L+DCRL YVTP+HQYP GV MSLARRL LLA
Sbjct: 248 AGHAFALAGAQLRGVAVDAEGIDCNVLNTLSDCRLAYVTPSHQYPLGVVMSLARRLELLA 307

Query: 305 WAERSDGWIIEDDYDGEYRYSGAPLAPLAALDRHGRVLYVGTFGKIAFPALRLGYLVLPS 364
           WAERS GWIIEDDYDGEYRYSGAPLAPLAALDR GRVLYVGTFGK+AFPALRLGYLVLP 
Sbjct: 308 WAERSGGWIIEDDYDGEYRYSGAPLAPLAALDRSGRVLYVGTFGKVAFPALRLGYLVLPP 367

Query: 365 KLVQAFSQGRAIAVRHSEVSSQCVMAEFMARGHFQRHIRRMRKAALKRRDVLKAGWPVDI 424
            LV+AF+Q RA+ VRHSEVS+Q VMAEFMA GHFQRHIRRMR+AAL RR+ L   W  ++
Sbjct: 368 TLVEAFAQRRAVDVRHSEVSTQAVMAEFMATGHFQRHIRRMRRAALSRRNALLNAWSGEL 427

Query: 425 PGLGAMPEVAAGLHVKVNVDNFAREQELVAKAEAVEVEVTPLSNFWLADCEVPVDKRAGL 484
            G+G+ P  AAGLH+ V VD+ AREQ+L+A+A +VEVE++ LSN+WL D   P D+RAGL
Sbjct: 428 AGVGSPPNAAAGLHLTVRVDSLAREQQLLAQARSVEVEISALSNYWLPDSSTPPDQRAGL 487

Query: 485 VLGFAAVPEGEIAEALMKLRKVW 507
           VLGFAAVPE  I +AL +LRK W
Sbjct: 488 VLGFAAVPEAAIRQALGRLRKAW 510