Pairwise Alignments

Query, 367 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

Subject, 364 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  414 bits (1063), Expect = e-120
 Identities = 207/362 (57%), Positives = 272/362 (75%), Gaps = 4/362 (1%)

Query: 5   KRLLAPFIAATLFAGALHAQAEQRTLRVYNWFDYITPQTLTAFQKDSGVKLVYDIFDTNE 64
           K LLA  +   + AGA  AQA+ + L VYNW DYI P T+  F+K+SG+K+VYD+FD+NE
Sbjct: 6   KTLLALSLMGAM-AGA--AQADDKVLHVYNWSDYIAPDTIANFEKESGIKVVYDVFDSNE 62

Query: 65  ALEAKLLTGNSGYDVVVPSNVFLAKQIEAGVFQPLDRSKLPNWQHLDPALMKLIEANDPG 124
            LEAKLL G SGYD+VVPSN FLAKQI+AGV+Q LD+SKL N+ +L+ +L+K +  +DP 
Sbjct: 63  TLEAKLLAGKSGYDIVVPSNNFLAKQIKAGVYQELDKSKLSNYDNLNKSLLKAVSVSDPD 122

Query: 125 NKFAVPYMYGTVLIGFNPAKVKAALGDNAPVDSWDLIFKEENIAKLKQCGVALLDSPSEI 184
           NK A PYM+G++ IG+NP KVKAALG +  +DSWD++ K ENIAKLK CGV+ LDSP+E+
Sbjct: 123 NKHAFPYMWGSIGIGYNPEKVKAALGVDK-IDSWDVLLKPENIAKLKSCGVSFLDSPTEM 181

Query: 185 LPLALQYLGLPPNSDKPADYKKAEELMLKIRPHITYFHSSKYMADIANGDICVAVGYSGS 244
           LP+AL YLGLP ++ K AD K+AE+L LKIRP I YFHSSKY++D+ANG+ICVAVGYSG 
Sbjct: 182 LPVALHYLGLPTDTQKKADLKQAEDLFLKIRPSIGYFHSSKYISDLANGNICVAVGYSGD 241

Query: 245 FSQAANRAREANNGVVVDMRLPKEGAPIWFDMLAIPKGAANPEDAHTFINYLLRPEVIAP 304
             QA +RA EA   V V   +PKEGA  +FDM+AIPK A N + A+ F+NYLL+P+V+A 
Sbjct: 242 IEQAKSRAAEAGGKVKVAYDIPKEGAGSFFDMVAIPKDAENVDAAYKFMNYLLKPQVMAE 301

Query: 305 ISDFVGYPNPNKDATDKVNPTIRNNPNLYPTAEAMAKLYTLKPLTRNAERARTRAWTRIK 364
           I++ V +PN N+ AT  V+  I ++P +YP A+  AKLY +  L    +R  TR+WT+IK
Sbjct: 302 ITNSVHFPNGNEKATALVDKEITSDPGIYPPADVQAKLYAIADLPAATQREMTRSWTKIK 361

Query: 365 SG 366
           SG
Sbjct: 362 SG 363