Pairwise Alignments

Query, 367 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

Subject, 359 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  418 bits (1074), Expect = e-121
 Identities = 190/338 (56%), Positives = 256/338 (75%)

Query: 29  TLRVYNWFDYITPQTLTAFQKDSGVKLVYDIFDTNEALEAKLLTGNSGYDVVVPSNVFLA 88
           T+++YNW DYI P T   FQK++G+   YD++D+NE L+ KL+TG SGYDVV PSN F+A
Sbjct: 21  TVKIYNWSDYIAPDTTKNFQKETGIGFTYDVYDSNETLDGKLMTGKSGYDVVFPSNHFMA 80

Query: 89  KQIEAGVFQPLDRSKLPNWQHLDPALMKLIEANDPGNKFAVPYMYGTVLIGFNPAKVKAA 148
           +QI+ G  + LD+S+LPNW++L+P L+K +E NDPGN    PY++G+  IG+N  KVKA 
Sbjct: 81  RQIQGGALKKLDKSQLPNWKNLNPVLLKALENNDPGNAHGFPYLWGSTGIGYNIDKVKAV 140

Query: 149 LGDNAPVDSWDLIFKEENIAKLKQCGVALLDSPSEILPLALQYLGLPPNSDKPADYKKAE 208
           LGDNAPVDSWDLIFK EN+AKL++CGVA+LD+  E+LP AL YLGLP +S KP DYKKAE
Sbjct: 141 LGDNAPVDSWDLIFKPENMAKLQKCGVAILDNGPELLPAALNYLGLPHHSKKPEDYKKAE 200

Query: 209 ELMLKIRPHITYFHSSKYMADIANGDICVAVGYSGSFSQAANRAREANNGVVVDMRLPKE 268
           +L++K+RP++ YFHSSKY AD+ANGDICVAVG+SG   QA +RA+EA NGV +   +PKE
Sbjct: 201 DLLMKVRPYVAYFHSSKYTADLANGDICVAVGFSGDILQAESRAKEAKNGVNIGYNIPKE 260

Query: 269 GAPIWFDMLAIPKGAANPEDAHTFINYLLRPEVIAPISDFVGYPNPNKDATDKVNPTIRN 328
           GA IWFDM+A+P  A N    + F+NYLLRP+V+A I+++V Y N N+ A   V+P I+ 
Sbjct: 261 GAAIWFDMVAMPADAPNEAAGYAFMNYLLRPQVMASITNYVHYANGNQAADSLVDPAIKA 320

Query: 329 NPNLYPTAEAMAKLYTLKPLTRNAERARTRAWTRIKSG 366
           +  +YP+ E M KL+ L+ +  N +R RTR W  I++G
Sbjct: 321 DTKIYPSPEMMGKLFALEAMPLNIDRVRTRVWNTIRTG 358